AMTR_s00071p00199450 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00071.217

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter


Gene families : OG_01_0002087 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002087_tree ,
OG_02_0003056 (LandPlants) Phylogenetic Tree(s): OG_02_0003056_tree ,
OG_03_0006702 (SeedPlants) Phylogenetic Tree(s): OG_03_0006702_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00071p00199450
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AT1G54350 No alias ABC transporter family protein 0.06 Archaeplastida
Cpa|evm.model.tig00001368.15 No alias ABC transporter D family member 2, chloroplastic... 0.02 Archaeplastida
Cre10.g439000 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01036685001 No alias Solute transport.primary active transport.ABC... 0.11 Archaeplastida
Gb_27197 No alias subfamily ABCD transporter 0.01 Archaeplastida
LOC_Os01g11946.1 No alias subfamily ABCD transporter 0.08 Archaeplastida
MA_10435060g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10436224g0010 No alias subfamily ABCD transporter 0.04 Archaeplastida
Mp2g18020.1 No alias subfamily ABCD transporter 0.11 Archaeplastida
Pp3c5_21800V3.1 No alias ABC transporter family protein 0.1 Archaeplastida
Pp3c6_11470V3.1 No alias ABC transporter family protein 0.03 Archaeplastida
Solyc12g017420.2.1 No alias subfamily ABCD transporter 0.06 Archaeplastida
Zm00001e026058_P001 No alias subfamily ABCD transporter 0.05 Archaeplastida
AT1G54350 No alias ABC transporter family protein 0.05 LandPlants
GSVIVT01036685001 No alias Solute transport.primary active transport.ABC... 0.08 LandPlants
Gb_27197 No alias subfamily ABCD transporter 0.01 LandPlants
LOC_Os01g11946.1 No alias subfamily ABCD transporter 0.07 LandPlants
Mp2g18020.1 No alias subfamily ABCD transporter 0.09 LandPlants
Pp3c5_21800V3.1 No alias ABC transporter family protein 0.09 LandPlants
Pp3c6_11470V3.1 No alias ABC transporter family protein 0.01 LandPlants
Solyc12g017420.2.1 No alias subfamily ABCD transporter 0.03 LandPlants
Zm00001e026058_P001 No alias subfamily ABCD transporter 0.05 LandPlants
AT1G54350 No alias ABC transporter family protein 0.05 SeedPlants
GSVIVT01036685001 No alias Solute transport.primary active transport.ABC... 0.08 SeedPlants
LOC_Os01g11946.1 No alias subfamily ABCD transporter 0.07 SeedPlants
Solyc12g017420.2.1 No alias subfamily ABCD transporter 0.03 SeedPlants
Zm00001e026058_P001 No alias subfamily ABCD transporter 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006810 transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 482 663
No external refs found!