Zm00001d006085 (GRMZM5G817037)


Aliases : GRMZM5G817037

Description : 29.5.11.20 protein.degradation.ubiquitin.proteasom Encodes 20S proteasome beta subunit PBF1 (PBF1). PBF1


Gene families : OG_01_0003741 (Gene family) Phylogenetic Tree(s): OG0003741_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d006085
Cluster HCCA cluster: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AT3G60820 PBF1 N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.03 Gene family
Cpa|evm.model.tig00001339.5 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.05 Gene family
Cre26.g756797 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.1 Gene family
GSVIVT01027613001 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.03 Gene family
LOC_Os09g32800 Os09g0505600 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.05 Gene family
Smo94273 PACid_15422737 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.04 Gene family
Solyc02g084920.3.1 Solyc02g084920.3 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA InterProScan
CC GO:0005839 proteasome core complex IEA InterProScan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 5 159
No external refs found!