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  5. LOC_Os05g41240.1

LOC_Os05g41240.1


Description : G2-like GARP transcription factor


Gene families : OG_01_0000027 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000027_tree ,
OG_02_0000069 (LandPlants) Phylogenetic Tree(s): OG_02_0000069_tree ,
OG_03_0000042 (SeedPlants) Phylogenetic Tree(s): OG_03_0000042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g41240.1
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
MA_10432937g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_636769g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Mp4g07330.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Pp3c23_11030V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c26_3820V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c2_2200V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c3_34900V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Smo438636 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
Solyc06g008200.3.1 No alias PHR1 transcription factor involved in proline synthesis... 0.02 Archaeplastida
Solyc10g076460.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e003093_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e007059_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e009294_P001 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
Zm00001e009653_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
AMTR_s00094p00028710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
Smo405399 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 LandPlants
Zm00001e007059_P001 No alias G2-like GARP transcription factor 0.02 LandPlants
Zm00001e025769_P001 No alias No annotation 0.01 LandPlants
AMTR_s00094p00028710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 SeedPlants
GSVIVT01033528001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 SeedPlants
MA_66960g0010 No alias no hits & (original description: none) 0.01 SeedPlants
Solyc09g091880.4.1 No alias G2-like GARP transcription factor. transcription factor (PHR1) 0.01 SeedPlants
Zm00001e007059_P001 No alias G2-like GARP transcription factor 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 131 177
IPR001005 SANT/Myb 48 98
No external refs found!