LOC_Os05g41172.2


Description : class V/Su(var) histone methyltransferase component of histone lysine methylation/demethylation. methylated DNA binding component SUVH1/3 of SUVH-DNAJ methylation reader complex


Gene families : OG_01_0000257 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000257_tree ,
OG_02_0000718 (LandPlants) Phylogenetic Tree(s): OG_02_0000718_tree ,
OG_03_0001503 (SeedPlants) Phylogenetic Tree(s): OG_03_0001503_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g41172.2
Cluster HCCA: Cluster_376

Target Alias Description ECC score Gene Family Method Actions
AT2G35160 SUVH5, SGD9 SU(VAR)3-9 homolog 5 0.02 Archaeplastida
AT5G04940 SUVH1 SU(VAR)3-9 homolog 1 0.04 Archaeplastida
GSVIVT01005913001 No alias Chromatin organisation.histone modifications.histone... 0.04 Archaeplastida
GSVIVT01027942001 No alias Chromatin organisation.DNA methylation.canonical... 0.04 Archaeplastida
GSVIVT01032986001 No alias Chromatin organisation.histone modifications.histone... 0.03 Archaeplastida
Gb_22168 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida
Gb_40999 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida
MA_790260g0010 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
MA_95753g0010 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
Pp3c4_9720V3.1 No alias SU(VAR)3-9 homolog 4 0.01 Archaeplastida
Solyc03g093700.3.1 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida
Solyc06g060960.3.1 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida
Solyc09g082050.4.1 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
Solyc09g090810.3.1 No alias class V/Su(var) histone methyltransferase component of... 0.04 Archaeplastida
Solyc10g077070.2.1 No alias class V/Su(var) histone methyltransferase component of... 0.04 Archaeplastida
Zm00001e007370_P001 No alias class V/Su(var) histone methyltransferase component of... 0.04 Archaeplastida
Zm00001e027327_P003 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
Zm00001e031994_P003 No alias class V/Su(var) histone methyltransferase component of... 0.07 Archaeplastida
Zm00001e033130_P002 No alias class V/Su(var) histone methyltransferase component of... 0.13 Archaeplastida
Zm00001e033937_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
AT5G04940 SUVH1 SU(VAR)3-9 homolog 1 0.04 LandPlants
GSVIVT01025844001 No alias Histone-lysine N-methyltransferase, H3 lysine-9 specific... 0.02 LandPlants
GSVIVT01027942001 No alias Chromatin organisation.DNA methylation.canonical... 0.04 LandPlants
Solyc09g082050.4.1 No alias class V/Su(var) histone methyltransferase component of... 0.03 LandPlants
Solyc09g090810.3.1 No alias class V/Su(var) histone methyltransferase component of... 0.04 LandPlants
Solyc10g077070.2.1 No alias class V/Su(var) histone methyltransferase component of... 0.03 LandPlants
Zm00001e027327_P003 No alias class V/Su(var) histone methyltransferase component of... 0.03 LandPlants
Zm00001e031994_P003 No alias class V/Su(var) histone methyltransferase component of... 0.08 LandPlants
Zm00001e033130_P002 No alias class V/Su(var) histone methyltransferase component of... 0.12 LandPlants
AT5G04940 SUVH1 SU(VAR)3-9 homolog 1 0.03 SeedPlants
GSVIVT01025844001 No alias Histone-lysine N-methyltransferase, H3 lysine-9 specific... 0.02 SeedPlants
Solyc09g082050.4.1 No alias class V/Su(var) histone methyltransferase component of... 0.02 SeedPlants
Solyc10g077070.2.1 No alias class V/Su(var) histone methyltransferase component of... 0.03 SeedPlants
Zm00001e019503_P001 No alias no hits & (original description: none) 0.01 SeedPlants
Zm00001e027327_P003 No alias class V/Su(var) histone methyltransferase component of... 0.03 SeedPlants
Zm00001e031994_P003 No alias class V/Su(var) histone methyltransferase component of... 0.06 SeedPlants
Zm00001e033130_P002 No alias class V/Su(var) histone methyltransferase component of... 0.12 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0018024 histone-lysine N-methyltransferase activity IEA Interproscan
BP GO:0034968 histone lysine methylation IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003105 SRA_YDG 215 367
IPR001214 SET_dom 513 646
IPR007728 Pre-SET_dom 396 494
No external refs found!