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  5. LOC_Os05g40280.1

LOC_Os05g40280.1


Description : transcription factor (REM)


Gene families : OG_01_0000741 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000741_tree ,
OG_02_0001199 (LandPlants) Phylogenetic Tree(s): OG_02_0001199_tree ,
OG_03_0001296 (SeedPlants) Phylogenetic Tree(s): OG_03_0001296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g40280.1
Cluster HCCA: Cluster_353

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00115450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
AT5G42700 No alias AP2/B3-like transcriptional factor family protein 0.05 Archaeplastida
MA_10430774g0010 No alias No annotation 0.03 Archaeplastida
Pp3c2_5990V3.1 No alias AP2/B3-like transcriptional factor family protein 0.02 Archaeplastida
Solyc06g007530.2.1 No alias transcription factor (REM) 0.03 Archaeplastida
Zm00001e000624_P003 No alias transcription factor (REM) 0.02 Archaeplastida
Zm00001e020584_P001 No alias transcription factor (REM) 0.02 Archaeplastida
Zm00001e031956_P001 No alias transcription factor (REM) 0.03 Archaeplastida
AT5G42700 No alias AP2/B3-like transcriptional factor family protein 0.05 LandPlants
Pp3c2_5990V3.1 No alias AP2/B3-like transcriptional factor family protein 0.02 LandPlants
Solyc06g007530.2.1 No alias transcription factor (REM) 0.03 LandPlants
Zm00001e000624_P003 No alias transcription factor (REM) 0.02 LandPlants
Zm00001e020584_P001 No alias transcription factor (REM) 0.02 LandPlants
Zm00001e031956_P001 No alias transcription factor (REM) 0.02 LandPlants
AT5G42700 No alias AP2/B3-like transcriptional factor family protein 0.05 SeedPlants
Solyc06g007530.2.1 No alias transcription factor (REM) 0.03 SeedPlants
Zm00001e000624_P003 No alias transcription factor (REM) 0.02 SeedPlants
Zm00001e020584_P001 No alias transcription factor (REM) 0.02 SeedPlants
Zm00001e031956_P001 No alias transcription factor (REM) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 139 227
No external refs found!