LOC_Os05g39680.1


Description : component SNX2 of Retromer protein recycling complex


Gene families : OG_01_0005576 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005576_tree ,
OG_02_0004310 (LandPlants) Phylogenetic Tree(s): OG_02_0004310_tree ,
OG_03_0004818 (SeedPlants) Phylogenetic Tree(s): OG_03_0004818_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g39680.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AT3G56140 No alias Protein of unknown function (DUF399 and DUF3411) 0.06 Archaeplastida
GSVIVT01032735001 No alias Protein RETICULATA-RELATED 6, chloroplastic... 0.02 Archaeplastida
Smo177305 No alias Protein RETICULATA-RELATED 5, chloroplastic... 0.02 Archaeplastida
Zm00001e019415_P003 No alias Protein RETICULATA-RELATED 6, chloroplastic... 0.02 Archaeplastida
AT3G56140 No alias Protein of unknown function (DUF399 and DUF3411) 0.06 LandPlants
GSVIVT01032735001 No alias Protein RETICULATA-RELATED 6, chloroplastic... 0.02 LandPlants
Zm00001e019415_P003 No alias Protein RETICULATA-RELATED 6, chloroplastic... 0.02 LandPlants
AT3G56140 No alias Protein of unknown function (DUF399 and DUF3411) 0.04 SeedPlants
GSVIVT01032735001 No alias Protein RETICULATA-RELATED 6, chloroplastic... 0.02 SeedPlants
Zm00001e019415_P003 No alias Protein RETICULATA-RELATED 6, chloroplastic... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR015404 Vps5_C 270 499
IPR007314 Cofac_haem-bd_dom 638 858
IPR001683 PX_dom 92 211
IPR021825 RETICULATA-related 965 1148
No external refs found!