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  5. LOC_Os05g38460.1

LOC_Os05g38460.1


Description : transcription factor (MYB)


Gene families : OG_01_0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000288 (LandPlants) Phylogenetic Tree(s): OG_02_0000288_tree ,
OG_03_0003085 (SeedPlants) Phylogenetic Tree(s): OG_03_0003085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g38460.1
Cluster HCCA: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00099460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.08 Archaeplastida
Cre07.g345350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01020038001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_02422 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_25814 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os09g01960.1 No alias transcription factor (MYB) 0.09 Archaeplastida
MA_10317499g0020 No alias transcription factor (MYB) 0.01 Archaeplastida
Mp8g11870.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c1_42920V3.1 No alias myb domain protein 103 0.01 Archaeplastida
Solyc04g074170.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc08g076700.1.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc08g076710.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc10g005460.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e003407_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e012156_P001 No alias No annotation 0.05 Archaeplastida
Zm00001e024037_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e024322_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e035652_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc11g071300.2.1 No alias transcription factor (MYB) 0.02 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 102 148
IPR001005 SANT/Myb 58 96
IPR001005 SANT/Myb 154 197
No external refs found!