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  5. LOC_Os05g37410.1

LOC_Os05g37410.1


Description : methylcytosine-specific DNA glycosylase (ROS1). bifunctional DNA glycosylase/lyase (ROS1)


Gene families : OG_01_0001102 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001102_tree ,
OG_02_0001721 (LandPlants) Phylogenetic Tree(s): OG_02_0001721_tree ,
OG_03_0001624 (SeedPlants) Phylogenetic Tree(s): OG_03_0001624_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g37410.1
Cluster HCCA: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00215000 evm_27.TU.AmTr_v1... DNA damage response.DNA repair mechanisms.base excision... 0.03 Archaeplastida
AT2G36490 DML1, ROS1 demeter-like 1 0.02 Archaeplastida
AT5G04560 DME HhH-GPD base excision DNA repair family protein 0.04 Archaeplastida
GSVIVT01033777001 No alias DNA damage response.DNA repair mechanisms.base excision... 0.03 Archaeplastida
GSVIVT01034713001 No alias DNA damage response.DNA repair mechanisms.base excision... 0.06 Archaeplastida
LOC_Os01g11900.1 No alias methylcytosine-specific DNA glycosylase (ROS1).... 0.03 Archaeplastida
MA_10430382g0010 No alias Transcriptional activator DEMETER OS=Arabidopsis... 0.03 Archaeplastida
Pp3c2_260V3.1 No alias demeter-like 1 0.02 Archaeplastida
Smo182514 No alias Chromatin organisation.DNA methylation.ROS1-mediated DNA... 0.01 Archaeplastida
AMTR_s00040p00215000 evm_27.TU.AmTr_v1... DNA damage response.DNA repair mechanisms.base excision... 0.02 LandPlants
AT5G04560 DME HhH-GPD base excision DNA repair family protein 0.03 LandPlants
GSVIVT01033777001 No alias DNA damage response.DNA repair mechanisms.base excision... 0.03 LandPlants
GSVIVT01034713001 No alias DNA damage response.DNA repair mechanisms.base excision... 0.05 LandPlants
AMTR_s00040p00215000 evm_27.TU.AmTr_v1... DNA damage response.DNA repair mechanisms.base excision... 0.02 SeedPlants
AT5G04560 DME HhH-GPD base excision DNA repair family protein 0.03 SeedPlants
GSVIVT01033777001 No alias DNA damage response.DNA repair mechanisms.base excision... 0.03 SeedPlants
GSVIVT01034713001 No alias DNA damage response.DNA repair mechanisms.base excision... 0.05 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR028925 RRM_DME 1711 1811
No external refs found!