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  5. AMTR_s00071p00116490

AMTR_s00071p00116490 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00071.91

Description : Chromatin organisation.histone chaperone activities.CAF1 histone chaperone complex.CAF1b/FAS2 component


Gene families : OG_01_0007295 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007295_tree ,
OG_02_0008229 (LandPlants) Phylogenetic Tree(s): OG_02_0008229_tree ,
OG_03_0009397 (SeedPlants) Phylogenetic Tree(s): OG_03_0009397_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00071p00116490
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g01680.1 No alias component CAF1b/FAS2 of CAF1 histone chaperone complex 0.02 Archaeplastida
Zm00001e029144_P001 No alias component CAF1b/FAS2 of CAF1 histone chaperone complex 0.02 Archaeplastida
AT5G64630 NFB01, NFB1, MUB3.9, FAS2 Transducin/WD40 repeat-like superfamily protein 0.02 LandPlants
LOC_Os08g01680.1 No alias component CAF1b/FAS2 of CAF1 histone chaperone complex 0.02 LandPlants
Zm00001e029144_P001 No alias component CAF1b/FAS2 of CAF1 histone chaperone complex 0.02 LandPlants
AT5G64630 NFB01, NFB1, MUB3.9, FAS2 Transducin/WD40 repeat-like superfamily protein 0.02 SeedPlants
LOC_Os08g01680.1 No alias component CAF1b/FAS2 of CAF1 histone chaperone complex 0.02 SeedPlants
Zm00001e029144_P001 No alias component CAF1b/FAS2 of CAF1 histone chaperone complex 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 342 367
IPR001680 WD40_repeat 14 40
IPR001680 WD40_repeat 63 93
IPR001680 WD40_repeat 147 182
IPR001680 WD40_repeat 102 140
No external refs found!