LOC_Os05g28320.1


Description : transcription factor (MYB)


Gene families : OG_01_0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000116 (LandPlants) Phylogenetic Tree(s): OG_02_0000116_tree ,
OG_03_0000157 (SeedPlants) Phylogenetic Tree(s): OG_03_0000157_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g28320.1
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AMTR_s00186p00015620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AT1G09540 ATMYB61, MYB61 myb domain protein 61 0.03 Archaeplastida
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.02 Archaeplastida
AT3G46130 ATMYB48-1,... myb domain protein 48 0.03 Archaeplastida
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.02 Archaeplastida
AT5G60890 MYB34, ATMYB34, ATR1 myb domain protein 34 0.07 Archaeplastida
GSVIVT01003662001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01015575001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_02020 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_02422 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_02997 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_03227 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_09986 No alias transcription factor (MYB) 0.01 Archaeplastida
Gb_18153 No alias transcription factor (MYB) 0.06 Archaeplastida
Gb_19333 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_22884 No alias transcription factor (MYB) 0.01 Archaeplastida
Gb_24073 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_29933 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_32143 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os03g04900.1 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10157944g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_124887g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_136123g0010 No alias transcription factor (MYB) 0.07 Archaeplastida
MA_15687g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_16413g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_173523g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_17672g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_223201g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_230300g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_37256g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_492415g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_52293g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_93127g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
Pp3c1_4970V3.1 No alias myb domain protein 106 0.01 Archaeplastida
Pp3c23_7530V3.1 No alias myb domain protein 77 0.02 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.01 Archaeplastida
Pp3c2_34670V3.1 No alias myb domain protein 105 0.01 Archaeplastida
Pp3c7_23450V3.1 No alias myb domain protein 106 0.04 Archaeplastida
Smo6091 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
Solyc02g067340.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc06g069850.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g075660.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc09g008250.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e004140_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e009831_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e012497_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e015239_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e016072_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e018391_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e018415_P001 No alias transcription factor (MYB) 0.09 Archaeplastida
Zm00001e020044_P001 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e020993_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e023100_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e023733_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e027003_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e028085_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e028135_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e028744_P002 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e031799_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e037510_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e038287_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 LandPlants
Pp3c23_7530V3.1 No alias myb domain protein 77 0.02 LandPlants
Pp3c2_34670V3.1 No alias myb domain protein 105 0.01 LandPlants
Smo6091 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 72 115
IPR001005 SANT/Myb 20 65
No external refs found!