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  5. LOC_Os05g28280.1

LOC_Os05g28280.1


Description : pre-60S ribosomal subunit export factor (ARX1)


Gene families : OG_01_0004434 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004434_tree ,
OG_02_0004622 (LandPlants) Phylogenetic Tree(s): OG_02_0004622_tree ,
OG_03_0005440 (SeedPlants) Phylogenetic Tree(s): OG_03_0005440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g28280.1
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00167240 evm_27.TU.AmTr_v1... ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum 0.02 Archaeplastida
AT3G51800 EBP1, ATEBP1, ATG2 metallopeptidase M24 family protein 0.22 Archaeplastida
Cpa|evm.model.tig00000553.33 No alias ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum 0.01 Archaeplastida
Cre13.g604650 No alias ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum 0.03 Archaeplastida
GSVIVT01003934001 No alias ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum 0.13 Archaeplastida
Gb_24072 No alias pre-60S ribosomal subunit export factor (ARX1) 0.04 Archaeplastida
MA_10426694g0010 No alias pre-60S ribosomal subunit export factor (ARX1) 0.1 Archaeplastida
MA_10426694g0020 No alias no hits & (original description: none) 0.08 Archaeplastida
Mp8g14760.1 No alias pre-60S ribosomal subunit export factor (ARX1) 0.02 Archaeplastida
Pp3c2_24640V3.1 No alias metallopeptidase M24 family protein 0.08 Archaeplastida
Pp3c7_14570V3.1 No alias metallopeptidase M24 family protein 0.04 Archaeplastida
Smo79780 No alias ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum 0.03 Archaeplastida
Solyc06g007200.4.1 No alias pre-60S ribosomal subunit export factor (ARX1) 0.16 Archaeplastida
Solyc06g082090.4.1 No alias pre-60S ribosomal subunit export factor (ARX1) 0.12 Archaeplastida
Zm00001e027220_P002 No alias pre-60S ribosomal subunit export factor (ARX1) 0.23 Archaeplastida
Zm00001e031491_P001 No alias pre-60S ribosomal subunit export factor (ARX1) 0.16 Archaeplastida
AMTR_s00007p00167240 evm_27.TU.AmTr_v1... ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum 0.02 LandPlants
AT3G51800 EBP1, ATEBP1, ATG2 metallopeptidase M24 family protein 0.22 LandPlants
GSVIVT01003934001 No alias ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum 0.13 LandPlants
Gb_24072 No alias pre-60S ribosomal subunit export factor (ARX1) 0.04 LandPlants
MA_10426694g0010 No alias pre-60S ribosomal subunit export factor (ARX1) 0.09 LandPlants
MA_10426694g0020 No alias no hits & (original description: none) 0.07 LandPlants
Mp8g14760.1 No alias pre-60S ribosomal subunit export factor (ARX1) 0.02 LandPlants
Pp3c2_24640V3.1 No alias metallopeptidase M24 family protein 0.08 LandPlants
Pp3c7_14570V3.1 No alias metallopeptidase M24 family protein 0.04 LandPlants
Smo79780 No alias ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum 0.03 LandPlants
Solyc06g007200.4.1 No alias pre-60S ribosomal subunit export factor (ARX1) 0.16 LandPlants
Solyc06g082090.4.1 No alias pre-60S ribosomal subunit export factor (ARX1) 0.12 LandPlants
Zm00001e027220_P002 No alias pre-60S ribosomal subunit export factor (ARX1) 0.2 LandPlants
Zm00001e031491_P001 No alias pre-60S ribosomal subunit export factor (ARX1) 0.15 LandPlants
AMTR_s00007p00167240 evm_27.TU.AmTr_v1... ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum 0.02 SeedPlants
AT3G51800 EBP1, ATEBP1, ATG2 metallopeptidase M24 family protein 0.21 SeedPlants
GSVIVT01003934001 No alias ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum 0.13 SeedPlants
Gb_24072 No alias pre-60S ribosomal subunit export factor (ARX1) 0.04 SeedPlants
MA_10426694g0010 No alias pre-60S ribosomal subunit export factor (ARX1) 0.09 SeedPlants
MA_10426694g0020 No alias no hits & (original description: none) 0.07 SeedPlants
Solyc06g007200.4.1 No alias pre-60S ribosomal subunit export factor (ARX1) 0.16 SeedPlants
Solyc06g082090.4.1 No alias pre-60S ribosomal subunit export factor (ARX1) 0.12 SeedPlants
Zm00001e027220_P002 No alias pre-60S ribosomal subunit export factor (ARX1) 0.2 SeedPlants
Zm00001e031491_P001 No alias pre-60S ribosomal subunit export factor (ARX1) 0.15 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000994 Pept_M24 23 226
No external refs found!