Zm00001d003984 (GRMZM2G000980)

Aliases : GRMZM2G000980

Description : 27.1.1 RNA.processing.splicing splicing factor-related

Gene families : OG_01_0002518 (Gene family) Phylogenetic Tree(s): OG0002518_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): Zm00001d003984
Cluster	HCCA cluster: Cluster_110

Target	Alias	Description	ECC score	Gene Family Method
AT5G51300	No alias	splicing factor-related	0.09	Gene family
Cpa\|evm.model.tig00001154.10	No alias	27.1.1 RNA.processing.splicing splicing factor-related	0.02	Gene family
Cre09.g386731	No alias	27.1.1 RNA.processing.splicing splicing factor-related	0.06	Gene family
GSVIVT01014212001	No alias	27.1.1 RNA.processing.splicing splicing factor-related	0.06	Gene family
MA_15045g0010	No alias	27.1.1 RNA.processing.splicing splicing factor-related	0.01	Gene family
MA_57875g0010	No alias	27.1.1 RNA.processing.splicing splicing factor-related	0.03	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004088	KH_dom_type_1	201	273
IPR000504	RRM_dom	429	498
IPR032570	SF1-HH	73	182

External Links

No external refs found!