LOC_Os05g23670.1


Description : histone demethylase (PKDM7). transcription factor (JUMONJI)


Gene families : OG_01_0001111 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001111_tree ,
OG_02_0001701 (LandPlants) Phylogenetic Tree(s): OG_02_0001701_tree ,
OG_03_0001587 (SeedPlants) Phylogenetic Tree(s): OG_03_0001587_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g23670.1
Cluster HCCA: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
AT1G63490 No alias transcription factor jumonji (jmjC) domain-containing protein 0.02 Archaeplastida
Gb_26073 No alias histone demethylase (KDM5). transcription factor (JUMONJI) 0.03 Archaeplastida
Pp3c16_4220V3.1 No alias Transcription factor jumonji (jmj) family protein / zinc... 0.06 Archaeplastida
Solyc06g008490.3.1 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.02 Archaeplastida
AT1G08620 PKDM7D Transcription factor jumonji (jmj) family protein / zinc... 0.02 LandPlants
GSVIVT01023517001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.02 LandPlants
Gb_09731 No alias transcription factor (JUMONJI) 0.02 LandPlants
Pp3c16_4220V3.1 No alias Transcription factor jumonji (jmj) family protein / zinc... 0.03 LandPlants
AT1G08620 PKDM7D Transcription factor jumonji (jmj) family protein / zinc... 0.02 SeedPlants
GSVIVT01023517001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.02 SeedPlants
Gb_09731 No alias transcription factor (JUMONJI) 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004198 Znf_C5HC2 539 590
IPR003888 FYrich_N 772 819
IPR003347 JmjC_dom 318 434
IPR003889 FYrich_C 826 910
IPR003349 JmjN 77 110
No external refs found!