AMTR_s00071p00055960 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00071.30

Description : RNA biosynthesis.transcriptional activation.NAC transcription factor

Gene families : OG_01_0000008 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000015 (LandPlants) Phylogenetic Tree(s): OG_02_0000015_tree ,
OG_03_0000234 (SeedPlants) Phylogenetic Tree(s): OG_03_0000234_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00071p00055960
Cluster	HCCA: Cluster_67

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00059p00187950	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AT1G32510	NAC011, ANAC011	NAC domain containing protein 11	0.03	Archaeplastida
AT2G02450	ANAC034, LOV1,...	NAC domain containing protein 35	0.03	Archaeplastida
AT3G10490	NAC052, ANAC052, ANAC051	NAC domain containing protein 52	0.02	Archaeplastida
AT3G12910	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
AT3G12977	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
AT4G17980	anac071, NAC071	NAC domain containing protein 71	0.04	Archaeplastida
AT5G13180	VNI2, NAC083, ANAC083	NAC domain containing protein 83	0.03	Archaeplastida
AT5G24590	ANAC091, TIP	No description available	0.03	Archaeplastida
AT5G46590	anac096, NAC096	NAC domain containing protein 96	0.04	Archaeplastida
GSVIVT01007194001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01019702001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01020387001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01020834001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01025515001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01033032001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01038666001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
Gb_01375	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_07132	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_12202	No alias	transcription factor (NAC)	0.04	Archaeplastida
Gb_12203	No alias	transcription factor (NAC)	0.02	Archaeplastida
Gb_17883	No alias	transcription factor (NAC)	0.02	Archaeplastida
Gb_20625	No alias	transcription factor (NAC)	0.04	Archaeplastida
Gb_22607	No alias	transcription factor (NAC)	0.05	Archaeplastida
Gb_37720	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os02g36880.2	No alias	transcription factor (NAC)	0.01	Archaeplastida
LOC_Os03g21030.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os05g34600.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os05g35170.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os08g02160.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os09g32260.2	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os10g33760.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os10g42130.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os11g03370.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_10431189g0020	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_11879g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_381604g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_64687g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_73369g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_98483g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
Mp4g11910.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Pp3c13_6470V3.1	No alias	NAC 007	0.01	Archaeplastida
Pp3c8_6080V3.1	No alias	NAC domain containing protein 2	0.03	Archaeplastida
Solyc04g005610.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc04g072220.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc05g021090.4.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc11g008000.2.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e002416_P001	No alias	transcription factor (NAC)	0.01	Archaeplastida
Zm00001e007603_P002	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e007905_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e023108_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e031709_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e034574_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e038934_P001	No alias	transcription factor (NAC)	0.01	Archaeplastida
AT1G32510	NAC011, ANAC011	NAC domain containing protein 11	0.02	LandPlants
AT2G24430	ANAC039, NAC038, ANAC038	NAC domain containing protein 38	0.02	LandPlants
AT3G10500	NAC053, anac053	NAC domain containing protein 53	0.02	LandPlants
AT3G12977	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	LandPlants
AT4G17980	anac071, NAC071	NAC domain containing protein 71	0.03	LandPlants
AT5G07680	ANAC080,...	NAC domain containing protein 80	0.02	LandPlants
AT5G46590	anac096, NAC096	NAC domain containing protein 96	0.03	LandPlants
GSVIVT01038666001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	LandPlants
Gb_01375	No alias	transcription factor (NAC)	0.02	LandPlants
Gb_22607	No alias	transcription factor (NAC)	0.03	LandPlants
LOC_Os05g35170.1	No alias	transcription factor (NAC)	0.04	LandPlants
LOC_Os09g32260.2	No alias	transcription factor (NAC)	0.02	LandPlants
LOC_Os10g33760.1	No alias	transcription factor (NAC)	0.02	LandPlants
LOC_Os10g42130.1	No alias	transcription factor (NAC)	0.02	LandPlants
LOC_Os11g03370.1	No alias	transcription factor (NAC)	0.03	LandPlants
MA_11879g0010	No alias	transcription factor (NAC)	0.02	LandPlants
MA_381604g0010	No alias	transcription factor (NAC)	0.02	LandPlants
Pp3c13_6470V3.1	No alias	NAC 007	0.01	LandPlants
Pp3c8_6080V3.1	No alias	NAC domain containing protein 2	0.02	LandPlants
Zm00001e007905_P001	No alias	transcription factor (NAC)	0.02	LandPlants
Zm00001e023108_P001	No alias	transcription factor (NAC)	0.02	LandPlants
Zm00001e031709_P001	No alias	transcription factor (NAC)	0.03	LandPlants
Zm00001e036720_P002	No alias	transcription factor (NAC)	0.02	LandPlants
AT1G32510	NAC011, ANAC011	NAC domain containing protein 11	0.02	SeedPlants
AT4G17980	anac071, NAC071	NAC domain containing protein 71	0.03	SeedPlants
AT5G24590	ANAC091, TIP	No description available	0.02	SeedPlants
AT5G46590	anac096, NAC096	NAC domain containing protein 96	0.03	SeedPlants
GSVIVT01016176001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	SeedPlants
GSVIVT01038666001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	SeedPlants
Gb_22607	No alias	transcription factor (NAC)	0.02	SeedPlants
MA_11879g0010	No alias	transcription factor (NAC)	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	6	134

External Links

No external refs found!

AMTR_s00071p00055960 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation