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  5. LOC_Os05g16660.2

LOC_Os05g16660.2


Description : component eIF3i of eIF3 mRNA-to-PIC binding complex


Gene families : OG_01_0003862 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003862_tree ,
OG_02_0004743 (LandPlants) Phylogenetic Tree(s): OG_02_0004743_tree ,
OG_03_0004853 (SeedPlants) Phylogenetic Tree(s): OG_03_0004853_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g16660.2
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00052p00194740 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.05 Archaeplastida
AT2G46280 TRIP-1, TIF3I1 TGF-beta receptor interacting protein 1 0.1 Archaeplastida
Cpa|evm.model.tig00021070.64 No alias No description available 0.02 Archaeplastida
Cre03.g194400 No alias Protein biosynthesis.translation... 0.11 Archaeplastida
GSVIVT01011562001 No alias Protein biosynthesis.translation... 0.09 Archaeplastida
Gb_07392 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida
MA_10429304g0010 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.03 Archaeplastida
Mp2g16930.1 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.15 Archaeplastida
Pp3c14_22340V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.11 Archaeplastida
Pp3c17_19090V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.1 Archaeplastida
Pp3c1_37340V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
Smo269383 No alias Protein biosynthesis.translation... 0.05 Archaeplastida
Solyc11g017070.2.1 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.11 Archaeplastida
Zm00001e011477_P001 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.05 Archaeplastida
Zm00001e032881_P001 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.15 Archaeplastida
AMTR_s00052p00194740 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.05 LandPlants
AT2G46280 TRIP-1, TIF3I1 TGF-beta receptor interacting protein 1 0.09 LandPlants
GSVIVT01011562001 No alias Protein biosynthesis.translation... 0.09 LandPlants
Gb_07392 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.04 LandPlants
MA_10429304g0010 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.02 LandPlants
Mp2g16930.1 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.15 LandPlants
Pp3c14_22340V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.11 LandPlants
Pp3c17_19090V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.1 LandPlants
Pp3c1_37340V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 LandPlants
Smo269383 No alias Protein biosynthesis.translation... 0.05 LandPlants
Solyc11g017070.2.1 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.11 LandPlants
Zm00001e011477_P001 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.05 LandPlants
Zm00001e032881_P001 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.15 LandPlants
AMTR_s00052p00194740 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.05 SeedPlants
AT2G46280 TRIP-1, TIF3I1 TGF-beta receptor interacting protein 1 0.09 SeedPlants
GSVIVT01011562001 No alias Protein biosynthesis.translation... 0.09 SeedPlants
Gb_07392 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.04 SeedPlants
Solyc11g017070.2.1 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.1 SeedPlants
Zm00001e011477_P001 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.05 SeedPlants
Zm00001e032881_P001 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.14 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 188 219
IPR001680 WD40_repeat 283 314
IPR001680 WD40_repeat 7 37
IPR001680 WD40_repeat 149 174
IPR001680 WD40_repeat 43 80
No external refs found!