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  5. LOC_Os05g15890.1

LOC_Os05g15890.1


Description : chromatin remodeling factor (ERCC6)


Gene families : OG_01_0006891 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006891_tree ,
OG_02_0008152 (LandPlants) Phylogenetic Tree(s): OG_02_0008152_tree ,
OG_03_0008705 (SeedPlants) Phylogenetic Tree(s): OG_03_0008705_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g15890.1
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Pp3c12_25750V3.1 No alias switch 2 0.02 Archaeplastida
Zm00001e012522_P002 No alias chromatin remodeling factor (ERCC6) 0.03 Archaeplastida
Pp3c12_25750V3.1 No alias switch 2 0.02 LandPlants
Zm00001e012522_P002 No alias chromatin remodeling factor (ERCC6) 0.03 LandPlants
Zm00001e012522_P002 No alias chromatin remodeling factor (ERCC6) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000330 SNF2_dom 145 403
IPR001650 Helicase_C 523 633
No external refs found!