Zm00001d003227 (GRMZM2G021710)


Aliases : GRMZM2G021710

Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0008204 (Gene family) Phylogenetic Tree(s): OG0008204_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d003227
Cluster HCCA cluster: Cluster_341

Target Alias Description ECC score Gene Family Method Actions
AT1G06710 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 Gene family
LOC_Os04g41140 Os04g0488500 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 894 939
IPR002885 Pentatricopeptide_repeat 273 320
IPR002885 Pentatricopeptide_repeat 461 502
IPR002885 Pentatricopeptide_repeat 523 572
IPR002885 Pentatricopeptide_repeat 714 762
IPR002885 Pentatricopeptide_repeat 644 692
IPR002885 Pentatricopeptide_repeat 856 882
IPR002885 Pentatricopeptide_repeat 428 451
IPR002885 Pentatricopeptide_repeat 209 238
IPR002885 Pentatricopeptide_repeat 607 638
IPR002885 Pentatricopeptide_repeat 780 813
IPR002885 Pentatricopeptide_repeat 331 389
No external refs found!