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  5. LOC_Os05g13950.1

LOC_Os05g13950.1


Description : component eIF3l of eIF3 mRNA-to-PIC binding complex


Gene families : OG_01_0004415 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004415_tree ,
OG_02_0004927 (LandPlants) Phylogenetic Tree(s): OG_02_0004927_tree ,
OG_03_0006987 (SeedPlants) Phylogenetic Tree(s): OG_03_0006987_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g13950.1
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00071210 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.03 Archaeplastida
Cpa|evm.model.tig00022075.15 No alias Protein biosynthesis.translation... 0.02 Archaeplastida
Cre17.g697450 No alias Protein biosynthesis.translation... 0.06 Archaeplastida
GSVIVT01035660001 No alias Protein biosynthesis.translation... 0.08 Archaeplastida
Gb_07559 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida
MA_4833g0010 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida
MA_4833g0020 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.05 Archaeplastida
MA_525836g0010 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida
Mp3g02920.1 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.1 Archaeplastida
Pp3c21_22430V3.1 No alias RNA polymerase I-associated factor PAF67 0.03 Archaeplastida
Pp3s48_70V3.1 No alias RNA polymerase I-associated factor PAF67 0.06 Archaeplastida
Smo146079 No alias Protein biosynthesis.translation... 0.09 Archaeplastida
Solyc08g068340.3.1 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.11 Archaeplastida
Zm00001e016402_P001 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.12 Archaeplastida
Zm00001e026109_P001 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.14 Archaeplastida
AMTR_s00109p00071210 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.03 LandPlants
GSVIVT01035660001 No alias Protein biosynthesis.translation... 0.08 LandPlants
Gb_07559 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.04 LandPlants
MA_4833g0010 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.04 LandPlants
MA_525836g0010 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.03 LandPlants
Mp3g02920.1 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.1 LandPlants
Pp3c21_22430V3.1 No alias RNA polymerase I-associated factor PAF67 0.03 LandPlants
Pp3s48_70V3.1 No alias RNA polymerase I-associated factor PAF67 0.06 LandPlants
Smo146079 No alias Protein biosynthesis.translation... 0.08 LandPlants
Solyc08g068340.3.1 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.11 LandPlants
Zm00001e016402_P001 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.12 LandPlants
Zm00001e026109_P001 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.14 LandPlants
AMTR_s00109p00071210 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.03 SeedPlants
GSVIVT01035660001 No alias Protein biosynthesis.translation... 0.07 SeedPlants
Gb_07559 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.04 SeedPlants
MA_4833g0010 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.04 SeedPlants
Solyc08g068340.3.1 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.11 SeedPlants
Zm00001e016402_P001 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.11 SeedPlants
Zm00001e026109_P001 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.13 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR019382 eIF3l 120 515
No external refs found!