Zm00001d003162 (GRMZM2G095598)


Aliases : GRMZM2G095598

Description : 27.3.7 RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family Positive regulator of photomorphogenesis that acts downstream of COP1 but can promote lateral root development independently of COP1 and also function as a daylength-sensitive regulator of shoot branching. CONSTANS-like 3 (COL3)


Gene families : OG_01_0000267 (Gene family) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d003162
Cluster HCCA cluster: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
AT3G02380 COL2, ATCOL2 CONSTANS-like 2 0.02 Gene family
AT5G15850 COL1, ATCOL1 CONSTANS-like 1 0.03 Gene family
AT5G24930 ATCOL4, COL4 CONSTANS-like 4 0.04 Gene family
Cre15.g635100 No alias No description available 0.01 Gene family
GSVIVT01029107001 No alias 27.3.7 RNA.regulation of transcription.C2C2(Zn) CO-like,... 0.04 Gene family
GSVIVT01036499001 No alias No description available 0.05 Gene family
LOC_Os02g08150 Os02g0178100 27.3.7 RNA.regulation of transcription.C2C2(Zn) CO-like,... 0.04 Gene family
LOC_Os02g39710 Os02g0610500 33.99 development.unspecified Homologous to the... 0.07 Gene family
LOC_Os04g42020 Os04g0497700 27.3.7 RNA.regulation of transcription.C2C2(Zn) CO-like,... 0.1 Gene family
LOC_Os06g44450 Os06g0654900 27.3.7 RNA.regulation of transcription.C2C2(Zn) CO-like,... 0.08 Gene family
LOC_Os09g06464 Os09g0240200 33.99 development.unspecified homologous to the... 0.13 Gene family
LOC_Os10g41100 Os10g0560400 No description available 0.09 Gene family
MA_54929g0010 No alias 27.3.7 RNA.regulation of transcription.C2C2(Zn) CO-like,... 0.03 Gene family
Smo185898 PACid_15408628 No description available 0.03 Gene family
Solyc02g089540.3.1 Solyc02g089540.3 33.99 development.unspecified Homologous to the... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010402 CCT_domain 236 278
IPR000315 Znf_B-box 59 101
IPR000315 Znf_B-box 20 56
No external refs found!