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  5. AMTR_s00071p00016000

AMTR_s00071p00016000 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00071.5

Description : Redox homeostasis.chloroplast redox homeostasis.M-type thioredoxin


Gene families : OG_01_0000516 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000516_tree ,
OG_02_0000996 (LandPlants) Phylogenetic Tree(s): OG_02_0000996_tree ,
OG_03_0001150 (SeedPlants) Phylogenetic Tree(s): OG_03_0001150_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00071p00016000
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
AT1G03680 ATHM1, THM1, TRX-M1, ATM1 thioredoxin M-type 1 0.15 Archaeplastida
AT1G43560 Aty2, ty2 thioredoxin Y2 0.04 Archaeplastida
AT1G50320 THX, ATHX, ATX thioredoxin X 0.14 Archaeplastida
AT3G15360 ATHM4, TRX-M4, ATM4 thioredoxin M-type 4 0.15 Archaeplastida
AT4G03520 ATHM2 Thioredoxin superfamily protein 0.02 Archaeplastida
Cre01.g052250 No alias Redox homeostasis.chloroplast redox homeostasis.X-type... 0.02 Archaeplastida
GSVIVT01010012001 No alias Redox homeostasis.chloroplast redox homeostasis.M-type... 0.06 Archaeplastida
GSVIVT01014360001 No alias Redox homeostasis.chloroplast redox homeostasis.M-type... 0.12 Archaeplastida
GSVIVT01026149001 No alias Redox homeostasis.chloroplast redox homeostasis.X-type... 0.03 Archaeplastida
GSVIVT01034548001 No alias Redox homeostasis.chloroplast redox homeostasis.Y-type... 0.1 Archaeplastida
Gb_00914 No alias M-type thioredoxin 0.02 Archaeplastida
Gb_31181 No alias M-type thioredoxin 0.04 Archaeplastida
Gb_37068 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g57930.1 No alias X-type thioredoxin 0.08 Archaeplastida
LOC_Os12g08730.1 No alias M-type thioredoxin 0.06 Archaeplastida
MA_10433314g0010 No alias X-type thioredoxin 0.06 Archaeplastida
Mp4g18950.1 No alias M-type thioredoxin 0.2 Archaeplastida
Pp3c24_4980V3.1 No alias thioredoxin X 0.06 Archaeplastida
Pp3c25_2880V3.1 No alias thioredoxin M-type 1 0.09 Archaeplastida
Pp3c5_23070V3.1 No alias thioredoxin M-type 1 0.05 Archaeplastida
Pp3c6_10040V3.1 No alias Thioredoxin superfamily protein 0.13 Archaeplastida
Pp3c6_10090V3.1 No alias thioredoxin M-type 1 0.03 Archaeplastida
Smo230724 No alias Redox homeostasis.chloroplast redox homeostasis.M-type... 0.02 Archaeplastida
Solyc01g008250.3.1 No alias X-type thioredoxin 0.15 Archaeplastida
Solyc07g063190.3.1 No alias M-type thioredoxin 0.05 Archaeplastida
Solyc10g006970.3.1 No alias M-type thioredoxin 0.09 Archaeplastida
Solyc12g013810.2.1 No alias M-type thioredoxin 0.12 Archaeplastida
Zm00001e006545_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e018385_P001 No alias M-type thioredoxin 0.06 Archaeplastida
Zm00001e039586_P001 No alias M-type thioredoxin 0.13 Archaeplastida
AT1G03680 ATHM1, THM1, TRX-M1, ATM1 thioredoxin M-type 1 0.13 LandPlants
AT3G15360 ATHM4, TRX-M4, ATM4 thioredoxin M-type 4 0.13 LandPlants
AT4G03520 ATHM2 Thioredoxin superfamily protein 0.02 LandPlants
GSVIVT01010012001 No alias Redox homeostasis.chloroplast redox homeostasis.M-type... 0.06 LandPlants
GSVIVT01014360001 No alias Redox homeostasis.chloroplast redox homeostasis.M-type... 0.11 LandPlants
Gb_00914 No alias M-type thioredoxin 0.02 LandPlants
Gb_31181 No alias M-type thioredoxin 0.04 LandPlants
LOC_Os12g08730.1 No alias M-type thioredoxin 0.06 LandPlants
Mp4g18950.1 No alias M-type thioredoxin 0.18 LandPlants
Pp3c25_2880V3.1 No alias thioredoxin M-type 1 0.09 LandPlants
Pp3c5_23070V3.1 No alias thioredoxin M-type 1 0.06 LandPlants
Pp3c6_10040V3.1 No alias Thioredoxin superfamily protein 0.13 LandPlants
Pp3c6_10090V3.1 No alias thioredoxin M-type 1 0.02 LandPlants
Smo230724 No alias Redox homeostasis.chloroplast redox homeostasis.M-type... 0.02 LandPlants
Solyc07g063190.3.1 No alias M-type thioredoxin 0.05 LandPlants
Solyc10g006970.3.1 No alias M-type thioredoxin 0.07 LandPlants
Solyc12g013810.2.1 No alias M-type thioredoxin 0.12 LandPlants
Zm00001e018385_P001 No alias M-type thioredoxin 0.05 LandPlants
Zm00001e039586_P001 No alias M-type thioredoxin 0.11 LandPlants
AT1G03680 ATHM1, THM1, TRX-M1, ATM1 thioredoxin M-type 1 0.13 SeedPlants
AT3G15360 ATHM4, TRX-M4, ATM4 thioredoxin M-type 4 0.13 SeedPlants
AT4G03520 ATHM2 Thioredoxin superfamily protein 0.02 SeedPlants
GSVIVT01010012001 No alias Redox homeostasis.chloroplast redox homeostasis.M-type... 0.06 SeedPlants
GSVIVT01014360001 No alias Redox homeostasis.chloroplast redox homeostasis.M-type... 0.1 SeedPlants
Gb_00914 No alias M-type thioredoxin 0.02 SeedPlants
Gb_31181 No alias M-type thioredoxin 0.03 SeedPlants
LOC_Os12g08730.1 No alias M-type thioredoxin 0.05 SeedPlants
Solyc07g063190.3.1 No alias M-type thioredoxin 0.04 SeedPlants
Solyc10g006970.3.1 No alias M-type thioredoxin 0.07 SeedPlants
Solyc12g013810.2.1 No alias M-type thioredoxin 0.12 SeedPlants
Zm00001e018385_P001 No alias M-type thioredoxin 0.05 SeedPlants
Zm00001e039586_P001 No alias M-type thioredoxin 0.11 SeedPlants

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 86 187
No external refs found!