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  5. Zm00001d003118

Zm00001d003118


Description : 29.2.1.2.1.11 protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S11 embryo defective 1080 (EMB1080)


Gene families : OG_01_0002752 (Gene family) Phylogenetic Tree(s): OG0002752_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d003118
Cluster HCCA cluster: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
AT3G48930 EMB1080 Nucleic acid-binding, OB-fold-like protein 0.02 Gene family
AT4G30800 No alias Nucleic acid-binding, OB-fold-like protein 0.02 Gene family
Cpa|evm.model.tig00000551.22 No alias 29.2.1.2.1.11 protein.synthesis.ribosomal... 0.01 Gene family
Cre12.g514500 No alias 29.2.1.2.1.11 protein.synthesis.ribosomal... 0.03 Gene family
GSVIVT01012877001 No alias 29.2.1.2.1.11 protein.synthesis.ribosomal... 0.04 Gene family
MA_19350g0010 No alias 29.2.1.2.1.11 protein.synthesis.ribosomal... 0.03 Gene family
Zm00001d002339 GRMZM2G044800 29.2.1.2.1.11 protein.synthesis.ribosomal... 0.03 Gene family
Zm00001d026286 GRMZM2G019325 29.2.1.2.1.11 protein.synthesis.ribosomal... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan
CC GO:0005622 intracellular IEA InterProScan
CC GO:0005840 ribosome IEA InterProScan
BP GO:0006412 translation IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000266 Ribosomal_S17/S11 74 139
IPR032440 Ribosomal_S11_N 4 72
No external refs found!