AMTR_s00071p00011330


Description : Photosynthesis.photophosphorylation.photosystem II.PS-II complex.reaction center complex.D1 component PsbA


Gene families : OG_01_0001158 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001158_tree ,
OG_02_0000799 (LandPlants) Phylogenetic Tree(s): OG_02_0000799_tree ,
OG_03_0000883 (SeedPlants) Phylogenetic Tree(s): OG_03_0000883_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00071p00011330
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00090p00098500 No alias Photosystem II protein D1 OS=Nephroselmis olivacea 0.03 Archaeplastida
ATCG00020 PSBA photosystem II reaction center protein A 0.12 Archaeplastida
GSVIVT01016441001 No alias Photosystem II protein D1 OS=Vitis vinifera 0.06 Archaeplastida
Gb_03955 No alias Photosystem II protein D1 OS=Cryptomeria japonica... 0.07 Archaeplastida
Gb_09035 No alias Photosystem II protein D1 OS=Cryptomeria japonica... 0.07 Archaeplastida
Gb_18604 No alias Photosystem II protein D1 OS=Adiantum capillus-veneris... 0.07 Archaeplastida
Gb_20129 No alias Photosystem II protein D1 OS=Zygnema circumcarinatum... 0.06 Archaeplastida
Gb_23102 No alias no description available(sp|q85bh5|psba_antag : 432.0) 0.05 Archaeplastida
Gb_26289 No alias no description available(sp|q85bh5|psba_antag : 489.0) 0.05 Archaeplastida
LOC_Os10g21192.1 No alias component PsbA/D1 of PS-II reaction center complex 0.14 Archaeplastida
LOC_Os10g39880.1 No alias Photosystem II protein D1 OS=Oryza sativa subsp. indica... 0.03 Archaeplastida
LOC_Os12g19580.1 No alias Photosystem II protein D1 OS=Oryza sativa subsp. indica... 0.13 Archaeplastida
Mp1g09910.1 No alias Photosystem II protein D1 OS=Chlorella ellipsoidea... 0.05 Archaeplastida
Mp3g12650.1 No alias Photosystem II protein D1 OS=Marchantia polymorpha... 0.05 Archaeplastida
Mp5g10950.1 No alias No annotation 0.04 Archaeplastida
Smo139195 No alias Photosystem II protein D1 OS=Phalaenopsis aphrodite... 0.11 Archaeplastida
Smo236852 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.11 Archaeplastida
Solyc00g500130.1.1 No alias component PsbA/D1 of PS-II reaction center complex 0.11 Archaeplastida
Solyc00g500200.1.1 No alias component PsbA/D1 of PS-II reaction center complex 0.11 Archaeplastida
Solyc00g500296.1.1 No alias component PsbA/D1 of PS-II reaction center complex 0.11 Archaeplastida
Solyc00g500329.1.1 No alias component PsbA/D1 of PS-II reaction center complex 0.11 Archaeplastida
Solyc02g021290.1.1 No alias Photosystem II protein D1 OS=Chlorella ellipsoidea... 0.03 Archaeplastida
Solyc05g016120.2.1 No alias no hits & (original description: none) 0.11 Archaeplastida
Solyc12g039030.1.1 No alias Photosystem II protein D1 OS=Oltmannsiellopsis viridis... 0.04 Archaeplastida
Zm00001e036844_P001 No alias Photosystem II protein D1 OS=Zea mays... 0.08 Archaeplastida
Zm00001e042113_P001 No alias Photosystem II protein D1 OS=Zea mays... 0.08 Archaeplastida
Zm00001e042176_P001 No alias component PsbA/D1 of PS-II reaction center complex 0.08 Archaeplastida
ATCG00020 PSBA photosystem II reaction center protein A 0.12 LandPlants
GSVIVT01016441001 No alias Photosystem II protein D1 OS=Vitis vinifera 0.05 LandPlants
Gb_03955 No alias Photosystem II protein D1 OS=Cryptomeria japonica... 0.07 LandPlants
Gb_09035 No alias Photosystem II protein D1 OS=Cryptomeria japonica... 0.07 LandPlants
Gb_18604 No alias Photosystem II protein D1 OS=Adiantum capillus-veneris... 0.07 LandPlants
Gb_20129 No alias Photosystem II protein D1 OS=Zygnema circumcarinatum... 0.06 LandPlants
Gb_23102 No alias no description available(sp|q85bh5|psba_antag : 432.0) 0.04 LandPlants
Gb_26289 No alias no description available(sp|q85bh5|psba_antag : 489.0) 0.05 LandPlants
LOC_Os10g21192.1 No alias component PsbA/D1 of PS-II reaction center complex 0.14 LandPlants
LOC_Os10g39880.1 No alias Photosystem II protein D1 OS=Oryza sativa subsp. indica... 0.03 LandPlants
LOC_Os12g19580.1 No alias Photosystem II protein D1 OS=Oryza sativa subsp. indica... 0.13 LandPlants
Mp1g09910.1 No alias Photosystem II protein D1 OS=Chlorella ellipsoidea... 0.05 LandPlants
Mp3g12650.1 No alias Photosystem II protein D1 OS=Marchantia polymorpha... 0.05 LandPlants
Mp5g10950.1 No alias No annotation 0.04 LandPlants
Smo139195 No alias Photosystem II protein D1 OS=Phalaenopsis aphrodite... 0.09 LandPlants
Smo236852 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.1 LandPlants
Solyc00g500130.1.1 No alias component PsbA/D1 of PS-II reaction center complex 0.11 LandPlants
Solyc00g500200.1.1 No alias component PsbA/D1 of PS-II reaction center complex 0.11 LandPlants
Solyc00g500296.1.1 No alias component PsbA/D1 of PS-II reaction center complex 0.11 LandPlants
Solyc00g500329.1.1 No alias component PsbA/D1 of PS-II reaction center complex 0.11 LandPlants
Solyc02g021290.1.1 No alias Photosystem II protein D1 OS=Chlorella ellipsoidea... 0.03 LandPlants
Solyc05g016120.2.1 No alias no hits & (original description: none) 0.11 LandPlants
Solyc12g039030.1.1 No alias Photosystem II protein D1 OS=Oltmannsiellopsis viridis... 0.04 LandPlants
Zm00001e036844_P001 No alias Photosystem II protein D1 OS=Zea mays... 0.09 LandPlants
Zm00001e042113_P001 No alias Photosystem II protein D1 OS=Zea mays... 0.08 LandPlants
Zm00001e042176_P001 No alias component PsbA/D1 of PS-II reaction center complex 0.08 LandPlants
ATCG00020 PSBA photosystem II reaction center protein A 0.13 SeedPlants
GSVIVT01016441001 No alias Photosystem II protein D1 OS=Vitis vinifera 0.06 SeedPlants
Gb_03955 No alias Photosystem II protein D1 OS=Cryptomeria japonica... 0.06 SeedPlants
Gb_09035 No alias Photosystem II protein D1 OS=Cryptomeria japonica... 0.06 SeedPlants
Gb_18604 No alias Photosystem II protein D1 OS=Adiantum capillus-veneris... 0.06 SeedPlants
Gb_20129 No alias Photosystem II protein D1 OS=Zygnema circumcarinatum... 0.05 SeedPlants
Gb_23102 No alias no description available(sp|q85bh5|psba_antag : 432.0) 0.04 SeedPlants
Gb_26289 No alias no description available(sp|q85bh5|psba_antag : 489.0) 0.05 SeedPlants
LOC_Os10g21192.1 No alias component PsbA/D1 of PS-II reaction center complex 0.13 SeedPlants
LOC_Os10g39880.1 No alias Photosystem II protein D1 OS=Oryza sativa subsp. indica... 0.03 SeedPlants
Solyc00g500130.1.1 No alias component PsbA/D1 of PS-II reaction center complex 0.12 SeedPlants
Solyc00g500200.1.1 No alias component PsbA/D1 of PS-II reaction center complex 0.12 SeedPlants
Solyc00g500296.1.1 No alias component PsbA/D1 of PS-II reaction center complex 0.12 SeedPlants
Solyc00g500329.1.1 No alias component PsbA/D1 of PS-II reaction center complex 0.12 SeedPlants
Solyc02g021290.1.1 No alias Photosystem II protein D1 OS=Chlorella ellipsoidea... 0.02 SeedPlants
Solyc05g016120.2.1 No alias no hits & (original description: none) 0.12 SeedPlants
Zm00001e036844_P001 No alias Photosystem II protein D1 OS=Zea mays... 0.08 SeedPlants
Zm00001e042113_P001 No alias Photosystem II protein D1 OS=Zea mays... 0.08 SeedPlants
Zm00001e042176_P001 No alias component PsbA/D1 of PS-II reaction center complex 0.08 SeedPlants

Type GO Term Name Evidence Source
BP GO:0009772 photosynthetic electron transport in photosystem II IEA Interproscan
BP GO:0019684 photosynthesis, light reaction IEA Interproscan
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000484 Photo_RC_L/M 28 328
No external refs found!