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  5. LOC_Os05g10770.1

LOC_Os05g10770.1


Description : histone demethylase (PKDM7). transcription factor (JUMONJI)


Gene families : OG_01_0001111 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001111_tree ,
OG_02_0001701 (LandPlants) Phylogenetic Tree(s): OG_02_0001701_tree ,
OG_03_0001587 (SeedPlants) Phylogenetic Tree(s): OG_03_0001587_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g10770.1
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00253500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.JUMONJI... 0.06 Archaeplastida
AT1G08620 PKDM7D Transcription factor jumonji (jmj) family protein / zinc... 0.04 Archaeplastida
AT1G63490 No alias transcription factor jumonji (jmjC) domain-containing protein 0.07 Archaeplastida
AT4G20400 PKDM7B, JMJ14 JUMONJI 14 0.07 Archaeplastida
GSVIVT01019761001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.06 Archaeplastida
GSVIVT01023517001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.08 Archaeplastida
GSVIVT01028351001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.03 Archaeplastida
Gb_26073 No alias histone demethylase (KDM5). transcription factor (JUMONJI) 0.04 Archaeplastida
Gb_27431 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.03 Archaeplastida
MA_91656g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp6g20340.1 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.04 Archaeplastida
Mp8g17910.1 No alias histone demethylase (KDM5). transcription factor (JUMONJI) 0.05 Archaeplastida
Pp3c21_10100V3.1 No alias JUMONJI 14 0.06 Archaeplastida
Pp3c21_10500V3.1 No alias transcription factor jumonji (jmjC) domain-containing protein 0.04 Archaeplastida
Solyc06g008490.3.1 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.02 Archaeplastida
Zm00001e030938_P001 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.03 Archaeplastida
AT1G08620 PKDM7D Transcription factor jumonji (jmj) family protein / zinc... 0.04 LandPlants
AT4G20400 PKDM7B, JMJ14 JUMONJI 14 0.05 LandPlants
GSVIVT01023517001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.08 LandPlants
GSVIVT01028351001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.02 LandPlants
GSVIVT01037956001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.02 LandPlants
Gb_27431 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.03 LandPlants
MA_10434186g0010 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.02 LandPlants
Mp6g20340.1 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.04 LandPlants
Solyc06g008490.3.1 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.02 LandPlants
Zm00001e030938_P001 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.03 LandPlants
AT1G08620 PKDM7D Transcription factor jumonji (jmj) family protein / zinc... 0.04 SeedPlants
AT4G20400 PKDM7B, JMJ14 JUMONJI 14 0.05 SeedPlants
GSVIVT01023517001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.08 SeedPlants
GSVIVT01028351001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.02 SeedPlants
GSVIVT01037956001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.02 SeedPlants
Gb_27431 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.03 SeedPlants
MA_10434186g0010 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.02 SeedPlants
Solyc06g008490.3.1 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.02 SeedPlants
Zm00001e030938_P001 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.03 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003889 FYrich_C 1081 1169
IPR004198 Znf_C5HC2 603 653
IPR003888 FYrich_N 1030 1074
IPR003349 JmjN 155 188
IPR003347 JmjC_dom 381 497
No external refs found!