Zm00001d002799 (GRMZM2G351330)


Aliases : GRMZM2G351330

Description : 27.3.22 RNA.regulation of transcription.HB,Homeobox transcription factor family encodes a putative transcription factor that


Gene families : OG_01_0000092 (Gene family) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d002799
Cluster HCCA cluster: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AT1G27045 No alias Homeobox-leucine zipper protein family 0.02 Gene family
AT2G46680 HB-7, ATHB-7, ATHB7 homeobox 7 0.02 Gene family
AT3G61890 HB-12, ATHB-12, ATHB12 homeobox 12 0.08 Gene family
AT4G36740 ATHB40, HB40, HB-5 homeobox protein 40 0.02 Gene family
AT5G03790 HB51, ATHB51, LMI1 homeobox 51 0.03 Gene family
GSVIVT01019655001 No alias No description available 0.04 Gene family
GSVIVT01020078001 No alias No description available 0.03 Gene family
GSVIVT01027407001 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.12 Gene family
LOC_Os02g43330 Os02g0649300 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.07 Gene family
LOC_Os03g07450 Os03g0170600 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
LOC_Os04g45810 Os04g0541700 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
MA_10428916g0010 No alias No description available 0.02 Gene family
MA_132936g0010 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
MA_60543g0010 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
MA_9241385g0010 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Solyc01g096320.3.1 Solyc01g096320.3 No description available 0.03 Gene family
Solyc02g087840.3.1 Solyc02g087840.3 No description available 0.04 Gene family
Solyc03g082550.3.1 Solyc03g082550.3 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Solyc05g006980.3.1 Solyc05g006980.3 No description available 0.03 Gene family
Solyc05g051460.3.1 Solyc05g051460.3 No description available 0.03 Gene family
Solyc09g008810.3.1 Solyc09g008810.3 No description available 0.02 Gene family
Zm00001d006195 GRMZM2G034113 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.04 Gene family
Zm00001d048227 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.08 Gene family
Zm00001d050310 GRMZM2G122076 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001356 Homeobox_dom 56 110
IPR003106 Leu_zip_homeo 112 153
No external refs found!