Zm00001d002762 (GRMZM2G055180)


Aliases : GRMZM2G055180

Description : 17.5.2 hormone metabolism.ethylene.signal transduction Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein ?//CONTAINS one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d002762
Cluster HCCA cluster: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AT1G04370 ERF14, ATERF14 Ethylene-responsive element binding factor 14 0.04 Gene family
AT1G06160 ORA59 octadecanoid-responsive Arabidopsis AP2/ERF 59 0.02 Gene family
AT1G28370 ATERF11, ERF11 ERF domain protein 11 0.02 Gene family
AT1G43160 RAP2.6 related to AP2 6 0.04 Gene family
AT1G50640 ATERF3, ERF3 ethylene responsive element binding factor 3 0.05 Gene family
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.05 Gene family
AT2G33710 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT3G15210 ATERF4, RAP2.5,... ethylene responsive element binding factor 4 0.04 Gene family
AT3G16770 ERF72, EBP, ATEBP, RAP2.3 ethylene-responsive element binding protein 0.03 Gene family
AT3G23230 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT3G61630 CRF6 cytokinin response factor 6 0.02 Gene family
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.04 Gene family
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.04 Gene family
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G07580 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G18450 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G47230 ERF5, ATERF-5, ATERF5 ethylene responsive element binding factor 5 0.03 Gene family
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT5G67190 DEAR2 DREB and EAR motif protein 2 0.04 Gene family
GSVIVT01001089001 No alias No description available 0.03 Gene family
GSVIVT01008649001 No alias No description available 0.03 Gene family
GSVIVT01013935001 No alias No description available 0.03 Gene family
GSVIVT01015540001 No alias No description available 0.02 Gene family
GSVIVT01018271001 No alias No description available 0.02 Gene family
GSVIVT01019519001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01021098001 No alias No description available 0.02 Gene family
GSVIVT01021146001 No alias No description available 0.03 Gene family
GSVIVT01028314001 No alias No description available 0.02 Gene family
GSVIVT01032983001 No alias No description available 0.03 Gene family
GSVIVT01034563001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
GSVIVT01036388001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01036389001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os01g64790 Os01g0868000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os01g66270 Os01g0885900 No description available 0.03 Gene family
LOC_Os02g42585 Os02g0638650 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os02g43790 Os02g0654700 No description available 0.04 Gene family
LOC_Os02g52670 Os02g0764700 No description available 0.03 Gene family
LOC_Os02g54050 Os02g0781300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g54160 Os02g0782700 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os03g05590 Os03g0150200 No description available 0.02 Gene family
LOC_Os03g08470 Os03g0183000 No description available 0.05 Gene family
LOC_Os03g08490 Os03g0183200 No description available 0.03 Gene family
LOC_Os04g32620 Os04g0398000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os04g34970 Os04g0429050 No description available 0.04 Gene family
LOC_Os04g46220 Os04g0546800 17.5.2 hormone metabolism.ethylene.signal transduction... 0.09 Gene family
LOC_Os04g52090 Os04g0610400 No description available 0.07 Gene family
LOC_Os04g55520 Os04g0648900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
LOC_Os04g57340 Os04g0669200 17.5.2 hormone metabolism.ethylene.signal transduction... 0.08 Gene family
LOC_Os05g41780 Os05g0497300 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
LOC_Os06g47590 Os06g0691100 No description available 0.06 Gene family
LOC_Os07g22770 Os07g0410700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os08g35240 Os08g0454000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os08g36920 Os08g0474000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os09g11480 Os09g0287000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os09g13940 Os09g0309700 No description available 0.03 Gene family
LOC_Os10g41330 Os10g0562900 No description available 0.05 Gene family
LOC_Os11g06770 Os11g0168500 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.06 Gene family
MA_10031781g0010 No alias No description available 0.02 Gene family
MA_116185g0010 No alias No description available 0.05 Gene family
MA_132427g0010 No alias No description available 0.04 Gene family
MA_203191g0010 No alias No description available 0.02 Gene family
MA_27309g0010 No alias No description available 0.02 Gene family
MA_3405g0010 No alias No description available 0.03 Gene family
MA_4032g0010 No alias No description available 0.02 Gene family
MA_446533g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_96512g0020 No alias No description available 0.04 Gene family
MA_97319g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Smo73155 PACid_15404551 No description available 0.04 Gene family
Solyc01g057080.1.1 Solyc01g057080.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc01g108240.3.1 Solyc01g108240.3 No description available 0.03 Gene family
Solyc02g077370.1.1 Solyc02g077370.1 No description available 0.04 Gene family
Solyc02g090800.1.1 Solyc02g090800.1 No description available 0.03 Gene family
Solyc03g093560.1.1 Solyc03g093560.1 No description available 0.02 Gene family
Solyc04g012050.3.1 Solyc04g012050.3 No description available 0.02 Gene family
Solyc04g071770.3.1 Solyc04g071770.3 No description available 0.04 Gene family
Solyc04g078640.2.1 Solyc04g078640.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc05g052030.1.1 Solyc05g052030.1 No description available 0.04 Gene family
Solyc06g063070.3.1 Solyc06g063070.3 No description available 0.02 Gene family
Solyc06g068830.2.1 Solyc06g068830.2 No description available 0.02 Gene family
Solyc06g082590.1.1 Solyc06g082590.1 No description available 0.04 Gene family
Solyc08g078170.1.1 Solyc08g078170.1 No description available 0.02 Gene family
Solyc08g078180.1.1 Solyc08g078180.1 No description available 0.02 Gene family
Solyc08g078190.1.1 Solyc08g078190.1 No description available 0.03 Gene family
Solyc09g089930.2.1 Solyc09g089930.2 No description available 0.03 Gene family
Solyc10g009110.1.1 Solyc10g009110.1 No description available 0.02 Gene family
Solyc10g050960.2.1 Solyc10g050960.2 No description available 0.02 Gene family
Solyc12g042210.2.1 Solyc12g042210.2 No description available 0.03 Gene family
Zm00001d005309 No alias No description available 0.03 Gene family
Zm00001d005892 GRMZM2G138396 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d016616 GRMZM2G016434 No description available 0.04 Gene family
Zm00001d017462 GRMZM2G466044 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d018288 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d020595 GRMZM2G052667 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d031796 GRMZM2G369472 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d036251 GRMZM2G328197 No description available 0.03 Gene family
Zm00001d042717 GRMZM2G149756 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.06 Gene family
Zm00001d046292 GRMZM2G073047 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d053859 GRMZM2G052720 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 132 182
No external refs found!