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  5. Cre17.g735400

Cre17.g735400 (VPS2.3)


Aliases : VPS2.3

Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.VPS2/CHMP2 component


Gene families : OG0003140 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003140_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g735400

Target Alias Description ECC score Gene Family Method Actions
Als_g11633 VPS2.3 component *(VPS2/CHMP2) of ESCRT-III complex & original... 0.01 OrthoFinder output from all 47 species
Als_g50388 VPS2.2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020830.6 VPS2.1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 OrthoFinder output from all 47 species
LOC_Os10g33660.1 VPS2.3, LOC_Os10g33660 component VPS2/CHMP2 of ESCRT-III complex 0.02 OrthoFinder output from all 47 species
Len_g40759 VPS2.2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g01831 VPS2.2 component *(VPS2/CHMP2) of ESCRT-III complex & original... 0.01 OrthoFinder output from all 47 species
Pir_g00373 VPS2.2 component *(VPS2/CHMP2) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Sam_g30316 No alias component *(VPS2/CHMP2) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Spa_g49659 VPS2.2 component *(VPS2/CHMP2) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Zm00001e004586_P001 VPS2.3, Zm00001e004586 component VPS2/CHMP2 of ESCRT-III complex 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 13 181
No external refs found!