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Description : Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN9 regulatory component
Gene families : OG0004118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004118_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre17.g734516 | |
| Cluster | HCCA: Cluster_12 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00048p00097960 | evm_27.TU.AmTr_v1... | Protein degradation.26S proteasome.regulatory... | 0.01 | OrthoFinder output from all 47 species | |
| AT4G19006 | No alias | Proteasome component (PCI) domain protein | 0.11 | OrthoFinder output from all 47 species | |
| AT5G45620 | No alias | Proteasome component (PCI) domain protein | 0.08 | OrthoFinder output from all 47 species | |
| Adi_g013038 | No alias | regulatory component *(RPN9) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g40396 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g44889 | No alias | regulatory component *(RPN9) of 26S proteasome &... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.29G058600.1 | Ceric.29G058600 | regulatory component *(RPN9) of 26S proteasome &... | 0.07 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000802.46 | No alias | No description available | 0.13 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000802.47 | No alias | 26S proteasome non-ATPase regulatory subunit 13 homolog... | 0.19 | OrthoFinder output from all 47 species | |
| Dac_g00791 | No alias | regulatory component *(RPN9) of 26S proteasome &... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g01140 | No alias | regulatory component *(RPN9) of 26S proteasome &... | 0.07 | OrthoFinder output from all 47 species | |
| Ehy_g04593 | No alias | regulatory component *(RPN9) of 26S proteasome &... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01013003001 | No alias | Protein degradation.26S proteasome.regulatory... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01013005001 | No alias | Protein degradation.26S proteasome.regulatory... | 0.11 | OrthoFinder output from all 47 species | |
| Gb_08030 | No alias | regulatory component RPN9 of 26S proteasome | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os01g32800.1 | LOC_Os01g32800 | regulatory component RPN9 of 26S proteasome | 0.13 | OrthoFinder output from all 47 species | |
| LOC_Os03g11570.1 | LOC_Os03g11570 | regulatory component RPN9 of 26S proteasome | 0.15 | OrthoFinder output from all 47 species | |
| Len_g01149 | No alias | regulatory component *(RPN9) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
| Mp8g12870.1 | No alias | regulatory component RPN9 of 26S proteasome | 0.12 | OrthoFinder output from all 47 species | |
| Nbi_g02036 | No alias | regulatory component *(RPN9) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g09138 | No alias | regulatory component *(RPN9) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g03065 | No alias | regulatory component *(RPN9) of 26S proteasome &... | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g12885 | No alias | regulatory component *(RPN9) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g27540 | No alias | regulatory component *(RPN9) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
| Smo266778 | No alias | Protein degradation.26S proteasome.regulatory... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc05g053140.3.1 | Solyc05g053140 | regulatory component RPN9 of 26S proteasome | 0.08 | OrthoFinder output from all 47 species | |
| Solyc09g090720.3.1 | Solyc09g090720 | regulatory component RPN9 of 26S proteasome | 0.1 | OrthoFinder output from all 47 species | |
| Tin_g00809 | No alias | regulatory component *(RPN9) of 26S proteasome &... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e002491_P003 | Zm00001e002491 | regulatory component RPN9 of 26S proteasome | 0.13 | OrthoFinder output from all 47 species | |
| Zm00001e013004_P001 | Zm00001e013004 | regulatory component RPN9 of 26S proteasome | 0.1 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000502 | proteasome complex | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003684 | damaged DNA binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005839 | proteasome core complex | IEP | HCCA |
| BP | GO:0006289 | nucleotide-excision repair | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009894 | regulation of catabolic process | IEP | HCCA |
| BP | GO:0010498 | proteasomal protein catabolic process | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0030163 | protein catabolic process | IEP | HCCA |
| MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0042176 | regulation of protein catabolic process | IEP | HCCA |
| BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1905368 | peptidase complex | IEP | HCCA |
| CC | GO:1905369 | endopeptidase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000717 | PCI_dom | 239 | 345 |
| No external refs found! |