Cre17.g728200

Description : Chromatin organisation.chromatin remodeling complexes.SWR1 complex.SWC2 component

Gene families : OG0007616 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007616_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre17.g728200

Target	Alias	Description	ECC score	Gene Family Method
Adi_g026500	SWC2, ATSWC2	component *(SWC2) of SWR1 chromatin remodeling complex &...	0.02	OrthoFinder output from all 47 species
Ehy_g22438	SWC2, ATSWC2	component *(SWC2) of SWR1 chromatin remodeling complex &...	0.02	OrthoFinder output from all 47 species
Ore_g45340	SWC2, ATSWC2	component *(SWC2) of SWR1 chromatin remodeling complex &...	0.03	OrthoFinder output from all 47 species
Sam_g07034	No alias	component *(SWC2) of SWR1 chromatin remodeling complex &...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006338	chromatin remodeling	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043486	obsolete histone exchange	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013272	Vps72/YL1_C	269	296
IPR008895	Vps72/YL1	6	232

External Links

No external refs found!

Cre17.g728200

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation