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  5. Cre17.g728150

Cre17.g728150 (YKT61, ATGP1, ATYKT61)


Aliases : YKT61, ATGP1, ATYKT61

Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.R-type SNARE longin components.YKT6-type protein


Gene families : OG0002670 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002670_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g728150
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Aob_g01292 YKT61, ATGP1, ATYKT61 R-type YKT6-group component of SNARE longin membrane... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.58 No alias VAMP-like protein YKT61 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dac_g00388 YKT61, ATGP1, ATYKT61 R-type YKT6-group component of SNARE longin membrane... 0.01 OrthoFinder output from all 47 species
GSVIVT01003730001 YKT61, ATGP1, ATYKT61 Vesicle trafficking.SNARE target membrane recognition... 0.04 OrthoFinder output from all 47 species
LOC_Os01g64650.2 YKT61, ATGP1,... YKT6-type R-type SNARE longin protein 0.03 OrthoFinder output from all 47 species
MA_252882g0010 YKT61, ATGP1, ATYKT61 VAMP-like protein YKT61 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_827461g0010 YKT61, ATGP1, ATYKT61 VAMP-like protein YKT61 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g00193 YKT61, ATGP1, ATYKT61 R-type YKT6-group component of SNARE longin membrane... 0.01 OrthoFinder output from all 47 species
Pnu_g09314 YKT61, ATGP1, ATYKT61 R-type YKT6-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Ppi_g21511 ATYKT62, YKT62 R-type YKT6-group component of SNARE longin membrane... 0.01 OrthoFinder output from all 47 species
Ppi_g27054 YKT61, ATGP1, ATYKT61 R-type YKT6-group component of SNARE longin membrane... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010773 YKT61, ATGP1, ATYKT61 R-type YKT6-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Smo166326 YKT61, ATGP1, ATYKT61 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
Solyc07g005200.3.1 YKT61, ATGP1,... YKT6-type R-type SNARE longin protein 0.03 OrthoFinder output from all 47 species
Spa_g35912 YKT61, ATGP1, ATYKT61 R-type YKT6-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Zm00001e028669_P001 YKT61, ATGP1,... YKT6-type R-type SNARE longin protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR001388 Synaptobrevin-like 140 196
IPR010908 Longin_dom 46 116
No external refs found!