Cre17.g717050

Description : ABC transporter G family member 21 OS=Arabidopsis thaliana

Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre17.g717050
Cluster	HCCA: Cluster_17

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00011p00258490	ABCG14,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AMTR_s00134p00069640	ABCG25,...	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
AT4G27420	No alias	ABC-2 type transporter family protein	0.01	OrthoFinder output from all 47 species
AT5G06530	No alias	ABC-2 type transporter family protein	0.02	OrthoFinder output from all 47 species
Adi_g019828	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g18590	No alias	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aob_g29670	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g07219	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g21658	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene01671.t1	Aspi01Gene01671	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene09991.t1	Aspi01Gene09991	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g06567	No alias	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Dde_g47725	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
GSVIVT01036869001	ABCG14	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Gb_26434	ABCG14	cytokinin transporter (ABCG14). subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Gb_38402	ABCG14	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
LOC_Os11g07600.1	ABCG25,...	subfamily ABCG transporter	0.01	OrthoFinder output from all 47 species
Len_g07347	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Nbi_g10128	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ore_g37168	No alias	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g36408	No alias	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ppi_g13835	ABCG26, WBC27	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ppi_g57469	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Sam_g30198	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc12g013630.1.1	Solyc12g013630	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Zm00001e024529_P001	ABCG25,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006855	xenobiotic transmembrane transport	IEP	HCCA
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015297	antiporter activity	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
BP	GO:0042908	xenobiotic transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	1044	1254
IPR003439	ABC_transporter-like_ATP-bd	527	677

External Links

No external refs found!

Cre17.g717050

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation