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  5. Cre17.g706300

Cre17.g706300 (UVH6, ATXPD)


Aliases : UVH6, ATXPD

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.XPD-type subunit


Gene families : OG0004711 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004711_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g706300
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00038580 UVH6, ATXPD,... RNA biosynthesis.RNA polymerase II-dependent... 0.01 OrthoFinder output from all 47 species
Aspi01Gene61451.t1 UVH6, ATXPD,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.34G044700.1 UVH6, ATXPD,... component *(XPD) of TFIIh basal transcription factor... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000241.101 UVH6, ATXPD RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder output from all 47 species
Dac_g03807 UVH6, ATXPD component *(XPD) of TFIIh basal transcription factor... 0.02 OrthoFinder output from all 47 species
GSVIVT01011125001 UVH6, ATXPD RNA biosynthesis.RNA polymerase II-dependent... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010643 HBB 332 475
IPR006555 ATP-dep_Helicase_C 586 761
IPR006935 Helicase/UvrB_N 19 66
IPR010614 DEAD_2 71 318
No external refs found!