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  5. Cre17.g697624

Cre17.g697624


Description : RNA processing.RNA decay.exosome complex.EXO9 core complex.MTR3/RRP41L component


Gene families : OG0006439 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006439_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g697624

Target Alias Description ECC score Gene Family Method Actions
Aop_g04989 No alias component *(MTR3/RRP41L) of exosome EXO9 core complex &... 0.01 OrthoFinder output from all 47 species
Azfi_s0132.g049232 No alias component *(MTR3/RRP41L) of exosome EXO9 core complex &... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001428.13 No alias RNA processing.RNA decay.exosome complex.EXO9 core... 0.02 OrthoFinder output from all 47 species
GSVIVT01025209001 No alias RNA processing.RNA decay.exosome complex.EXO9 core... 0.01 OrthoFinder output from all 47 species
LOC_Os03g62720.1 LOC_Os03g62720 component MTR3/RRP41L of exosome EXO9 core complex 0.03 OrthoFinder output from all 47 species
Mp2g19580.1 No alias component MTR3/RRP41L of exosome EXO9 core complex 0.04 OrthoFinder output from all 47 species
Pir_g05346 No alias component *(MTR3/RRP41L) of exosome EXO9 core complex &... 0.01 OrthoFinder output from all 47 species
Zm00001e035628_P002 Zm00001e035628 component MTR3/RRP41L of exosome EXO9 core complex 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001247 ExoRNase_PH_dom1 1 101
No external refs found!