Cre16.g687300


Description : Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0007302 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007302_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g687300

Target Alias Description ECC score Gene Family Method Actions
AT2G44920 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.08 OrthoFinder output from all 47 species
Ceric.01G001200.1 Ceric.01G001200 not classified & original description: pacid=50590454... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.57 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Ehy_g05414 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10232509g0010 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
MA_503287g0010 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Mp7g06080.1 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.05 OrthoFinder output from all 47 species
Msp_g04471 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g00349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e025798_P001 Zm00001e025798 Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005534 galactose binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0048029 monosaccharide binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 142 169
IPR001646 5peptide_repeat 84 116
No external refs found!