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  5. Cre16.g685277

Cre16.g685277


Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-3 Golgi to vacuole cargo adaptor complex.AP3M medium mu subunit


Gene families : OG0004664 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004664_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g685277

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00084380 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
AT5G46630 No alias Clathrin adaptor complexes medium subunit family protein 0.04 OrthoFinder output from all 47 species
Adi_g117362 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021168.13 No alias AP-2 complex subunit mu OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01013199001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 OrthoFinder output from all 47 species
LOC_Os02g46510.1 LOC_Os02g46510 medium subunit mu of AP-2 cargo adaptor complex 0.02 OrthoFinder output from all 47 species
Len_g09704 No alias medium subunit mu of AP-2 cargo adaptor complex &... 0.02 OrthoFinder output from all 47 species
Mp1g27000.1 No alias medium subunit mu of AP-2 cargo adaptor complex 0.05 OrthoFinder output from all 47 species
Msp_g11541 No alias medium subunit mu of AP-2 cargo adaptor complex &... 0.03 OrthoFinder output from all 47 species
Msp_g43302 No alias medium subunit mu of AP-2 cargo adaptor complex &... 0.02 OrthoFinder output from all 47 species
Nbi_g02910 No alias medium subunit mu of AP-2 cargo adaptor complex &... 0.02 OrthoFinder output from all 47 species
Pp3c27_2250V3.1 Pp3c27_2250 Clathrin adaptor complexes medium subunit family protein 0.01 OrthoFinder output from all 47 species
Smo173172 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
Zm00001e015492_P001 Zm00001e015492 medium subunit mu of AP-2 cargo adaptor complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
BP GO:0000077 DNA damage checkpoint signaling IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
CC GO:0030896 checkpoint clamp complex IEP HCCA
BP GO:0031570 DNA integrity checkpoint signaling IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042770 signal transduction in response to DNA damage IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 7 134
IPR028565 MHD 185 438
No external refs found!