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  5. Cre16.g683371

Cre16.g683371


Description : Polyamine metabolism.putrescine.synthesis.cytosolic pathway.ornithine decarboxylase


Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g683371

Target Alias Description ECC score Gene Family Method Actions
AT5G15950 No alias Adenosylmethionine decarboxylase family protein 0.02 OrthoFinder output from all 47 species
Aspi01Gene10354.t1 Aspi01Gene10354 ornithine decarboxylase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g41149 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_75633g0020 SAMDC S-adenosyl methionine decarboxylase 0.01 OrthoFinder output from all 47 species
Ppi_g04665 No alias EC_4.1 carbon-carbon lyase & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR022643 De-COase2_C 385 487
IPR022644 De-COase2_N 149 384
No external refs found!