1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g05800.1

LOC_Os05g05800.1


Description : component TIR1/AFB of auxin receptor complex. component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG_01_0000271 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000271_tree ,
OG_02_0000806 (LandPlants) Phylogenetic Tree(s): OG_02_0000806_tree ,
OG_03_0000796 (SeedPlants) Phylogenetic Tree(s): OG_03_0000796_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g05800.1
Cluster HCCA: Cluster_380

Target Alias Description ECC score Gene Family Method Actions
Zm00001e027505_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.02 Archaeplastida
Zm00001e031742_P001 No alias component COI of jasmonic acid receptor complex 0.03 Archaeplastida
Zm00001e023831_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.02 LandPlants
Zm00001e027505_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.02 LandPlants
Zm00001e015908_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.02 SeedPlants
Zm00001e023831_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.02 SeedPlants
Zm00001e027505_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.02 SeedPlants
Zm00001e040776_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041567 COI1_F-box 20 58
IPR041101 Transp_inhibit 77 123
IPR001611 Leu-rich_rpt 166 181
No external refs found!