1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre16.g674950

Cre16.g674950


Description : Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum


Gene families : OG0002889 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002889_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g674950

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00187330 evm_27.TU.AmTr_v1... Prolycopene isomerase, chloroplastic OS=Daucus carota 0.02 OrthoFinder output from all 47 species
AT1G57770 No alias FAD/NAD(P)-binding oxidoreductase family protein 0.06 OrthoFinder output from all 47 species
Aev_g49491 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g06469 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09756.t1 Aspi01Gene09756 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67252.t1 Aspi01Gene67252 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g08553 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g27219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23383 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g15650 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os03g62510.1 LOC_Os03g62510 Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.01 OrthoFinder output from all 47 species
Lfl_g05426 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_10428345g0020 No alias Prolycopene isomerase, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10428660g0010 No alias Prolycopene isomerase 1, chloroplastic OS=Oncidium... 0.03 OrthoFinder output from all 47 species
Msp_g48604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08605 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo229587 No alias Prolycopene isomerase 1, chloroplastic OS=Oncidium... 0.03 OrthoFinder output from all 47 species
Tin_g23774 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e011669_P002 Zm00001e011669 Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006814 sodium ion transport IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 55 543
No external refs found!