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  5. Cre16.g671100

Cre16.g671100


Description : Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN3 component


Gene families : OG0005199 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005199_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g671100
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00171p00017320 CSN3, FUS11,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.02 OrthoFinder output from all 47 species
Adi_g082421 CSN3, FUS11, COP13 component *(CSN3) of COP9 signalosome complex & original... 0.01 OrthoFinder output from all 47 species
Als_g09444 CSN3, FUS11, COP13 component *(CSN3) of COP9 signalosome complex & original... 0.01 OrthoFinder output from all 47 species
Als_g30750 CSN3, FUS11, COP13 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g06748 CSN3, FUS11, COP13 component *(CSN3) of COP9 signalosome complex & original... 0.03 OrthoFinder output from all 47 species
Cba_g16207 CSN3, FUS11, COP13 component *(CSN3) of COP9 signalosome complex & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001374.12 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g24753 CSN3, FUS11, COP13 component *(CSN3) of COP9 signalosome complex & original... 0.01 OrthoFinder output from all 47 species
Gb_26185 CSN3, FUS11, COP13 component CSN3 of COP9 signalosome complex 0.04 OrthoFinder output from all 47 species
LOC_Os08g02550.1 CSN3, FUS11,... component CSN3 of COP9 signalosome complex 0.05 OrthoFinder output from all 47 species
Lfl_g36540 CSN3, FUS11, COP13 component *(CSN3) of COP9 signalosome complex & original... 0.01 OrthoFinder output from all 47 species
MA_169864g0010 CSN3, FUS11, COP13 component CSN3 of COP9 signalosome complex 0.02 OrthoFinder output from all 47 species
MA_39616g0010 No alias COP9 signalosome complex subunit 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp1g03910.1 CSN3, FUS11, COP13 component CSN3 of COP9 signalosome complex 0.07 OrthoFinder output from all 47 species
Nbi_g04164 CSN3, FUS11, COP13 component *(CSN3) of COP9 signalosome complex & original... 0.02 OrthoFinder output from all 47 species
Pir_g09420 CSN3, FUS11, COP13 component *(CSN3) of COP9 signalosome complex & original... 0.01 OrthoFinder output from all 47 species
Smo167575 CSN3, FUS11, COP13 Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.02 OrthoFinder output from all 47 species
Solyc02g093920.2.1 CSN3, FUS11,... component CSN3 of COP9 signalosome complex 0.02 OrthoFinder output from all 47 species
Zm00001e021822_P002 CSN3, FUS11,... component CSN3 of COP9 signalosome complex 0.02 OrthoFinder output from all 47 species
Zm00001e029231_P001 CSN3, FUS11,... component CSN3 of COP9 signalosome complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0001401 SAM complex IEP HCCA
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005742 mitochondrial outer membrane translocase complex IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098799 outer mitochondrial membrane protein complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000717 PCI_dom 256 356
No external refs found!