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  5. Cre16.g665750

Cre16.g665750


Description : Trans-splicing factor Raa2, chloroplastic OS=Chlamydomonas reinhardtii


Gene families : OG0003765 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003765_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g665750
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
Adi_g012222 No alias TruB-type tRNA pseudouridine synthase & original... 0.01 OrthoFinder output from all 47 species
Aob_g05961 No alias TruB-type tRNA pseudouridine synthase & original... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR002501 PsdUridine_synth_N 80 167
No external refs found!