1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre16.g661900

Cre16.g661900


Description : DEAD-box ATP-dependent RNA helicase 26 OS=Arabidopsis thaliana


Gene families : OG0001618 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001618_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g661900

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00261910 evm_27.TU.AmTr_v1... Probable DEAD-box ATP-dependent RNA helicase 48... 0.02 OrthoFinder output from all 47 species
Aop_g11504 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g13231 No alias mRNA helicase *(RH31) & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g15777 No alias mRNA helicase *(RH31) & original description: none 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001224.23 No alias DEAD-box ATP-dependent RNA helicase 26 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020713.11 No alias Probable DEAD-box ATP-dependent RNA helicase 48... 0.01 OrthoFinder output from all 47 species
Dac_g12157 No alias mRNA helicase *(RH31) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19403 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01019804001 No alias DEAD-box ATP-dependent RNA helicase 48 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
GSVIVT01027084001 No alias DEAD-box ATP-dependent RNA helicase 31 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
LOC_Os02g57980.1 LOC_Os02g57980 DEAD-box ATP-dependent RNA helicase 48 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Lfl_g03200 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g30281 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g30282 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo174634 No alias DEAD-box ATP-dependent RNA helicase 31 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Zm00001e037076_P003 Zm00001e037076 DEAD-box ATP-dependent RNA helicase 31 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 316 421
IPR011545 DEAD/DEAH_box_helicase_dom 95 271
No external refs found!