1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g05320.1

LOC_Os05g05320.1


Description : Pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Arabidopsis thaliana (sp|q8vyr5|pp351_arath : 514.0)


Gene families : OG_01_0005875 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005875_tree ,
OG_02_0004866 (LandPlants) Phylogenetic Tree(s): OG_02_0004866_tree ,
OG_03_0006038 (SeedPlants) Phylogenetic Tree(s): OG_03_0006038_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g05320.1
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00166p00033890 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g35850,... 0.02 Archaeplastida
AT4G35850 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.09 Archaeplastida
GSVIVT01032367001 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.05 Archaeplastida
Gb_40110 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.07 Archaeplastida
Gb_40112 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.02 Archaeplastida
MA_10434276g0010 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.05 Archaeplastida
MA_5480780g0010 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.06 Archaeplastida
MA_9026623g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp7g04570.1 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.07 Archaeplastida
Pp3c1_21850V3.1 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.06 Archaeplastida
Solyc01g112020.3.1 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.11 Archaeplastida
Zm00001e027516_P001 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.11 Archaeplastida
AMTR_s00166p00033890 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g35850,... 0.02 LandPlants
AT4G35850 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.08 LandPlants
GSVIVT01032367001 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.04 LandPlants
Gb_40110 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.05 LandPlants
MA_10434276g0010 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.03 LandPlants
MA_5480780g0010 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.05 LandPlants
MA_9026623g0010 No alias no hits & (original description: none) 0.02 LandPlants
Mp7g04570.1 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.07 LandPlants
Pp3c1_21850V3.1 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.06 LandPlants
Solyc01g112020.3.1 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.11 LandPlants
Zm00001e027516_P001 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.11 LandPlants
AMTR_s00166p00033890 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g35850,... 0.02 SeedPlants
AT4G35850 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.08 SeedPlants
GSVIVT01032367001 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.04 SeedPlants
Gb_40110 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.05 SeedPlants
MA_10434276g0010 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.03 SeedPlants
MA_5480780g0010 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.05 SeedPlants
MA_9026623g0010 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc01g112020.3.1 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.11 SeedPlants
Zm00001e027516_P001 No alias Pentatricopeptide repeat-containing protein At4g35850,... 0.11 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR033443 PPR_long 67 179
IPR002885 Pentatricopeptide_repeat 306 324
No external refs found!