Cre16.g660150


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS20 component


Gene families : OG0000293 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g660150
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Adi_g001387 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Adi_g002133 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Adi_g009361 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 39 species
Adi_g029473 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 39 species
Adi_g062458 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 39 species
Adi_g079381 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Adi_g104450 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Als_g48822 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 39 species
Als_g57515 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 39 species
Aob_g42269 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 39 species
Aop_g24821 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 39 species
Cba_g43360 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Cba_g68169 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 39 species
Ehy_g03042 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 39 species
Nbi_g35331 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 39 species
Ppi_g60053 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR027486 Ribosomal_S10_dom 23 117
No external refs found!