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  5. Cre16.g649950

Cre16.g649950


Description : Chromatin organisation.histones.H4-type histone


Gene families : OG0000254 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000254_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g649950
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00220160 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Ala_g08855 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010907 No alias histone *(H4) & original description: CDS=1-312 0.02 OrthoFinder output from all 47 species
Azfi_s0102.g044422 No alias histone *(H4) & original description: CDS=1-312 0.02 OrthoFinder output from all 47 species
Ceric.11G079500.1 Ceric.11G079500 histone *(H4) & original description: pacid=50595239... 0.01 OrthoFinder output from all 47 species
Ceric.12G065700.1 Ceric.12G065700 histone *(H4) & original description: pacid=50601214... 0.01 OrthoFinder output from all 47 species
Ceric.12G080900.1 Ceric.12G080900 histone *(H4) & original description: pacid=50601464... 0.01 OrthoFinder output from all 47 species
Ceric.14G089900.1 Ceric.14G089900 histone *(H4) & original description: pacid=50633501... 0.01 OrthoFinder output from all 47 species
Ceric.28G045100.1 Ceric.28G045100 histone *(H4) & original description: pacid=50570632... 0.01 OrthoFinder output from all 47 species
Ceric.28G048800.1 Ceric.28G048800 histone *(H4) & original description: pacid=50569578... 0.01 OrthoFinder output from all 47 species
Ceric.29G055000.1 Ceric.29G055000 histone *(H4) & original description: pacid=50624348... 0.01 OrthoFinder output from all 47 species
Ceric.38G017000.1 Ceric.38G017000 histone *(H4) & original description: pacid=50580621... 0.01 OrthoFinder output from all 47 species
Dcu_g11138 No alias histone *(H4) & original description: none 0.01 OrthoFinder output from all 47 species
Gb_10374 No alias histone (H4) 0.01 OrthoFinder output from all 47 species
Gb_15459 No alias histone (H4) 0.01 OrthoFinder output from all 47 species
Gb_21914 No alias histone (H4) 0.01 OrthoFinder output from all 47 species
Gb_21918 No alias histone (H4) 0.01 OrthoFinder output from all 47 species
Gb_24017 No alias histone (H4) 0.01 OrthoFinder output from all 47 species
Len_g55897 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
MA_141877g0030 No alias histone (H4) 0.01 OrthoFinder output from all 47 species
Mp5g16840.1 No alias histone (H4) 0.01 OrthoFinder output from all 47 species
Pp3c22_22340V3.1 Pp3c22_22340 histone H4 0.01 OrthoFinder output from all 47 species
Pp3c7_22150V3.1 Pp3c7_22150 histone H4 0.01 OrthoFinder output from all 47 species
Solyc04g011390.1.1 Solyc04g011390 histone (H4) 0.01 OrthoFinder output from all 47 species
Solyc05g054610.1.1 Solyc05g054610 histone (H4) 0.01 OrthoFinder output from all 47 species
Solyc06g005420.1.1 Solyc06g005420 histone (H4) 0.01 OrthoFinder output from all 47 species
Solyc06g005430.1.1 Solyc06g005430 histone (H4) 0.01 OrthoFinder output from all 47 species
Solyc06g072240.1.1 Solyc06g072240 histone (H4) 0.01 OrthoFinder output from all 47 species
Solyc06g075830.2.1 Solyc06g075830 histone (H4) 0.01 OrthoFinder output from all 47 species
Solyc06g075850.1.1 Solyc06g075850 histone (H4) 0.01 OrthoFinder output from all 47 species
Solyc06g075960.1.1 Solyc06g075960 histone (H4) 0.01 OrthoFinder output from all 47 species
Solyc11g066160.1.1 Solyc11g066160 histone (H4) 0.01 OrthoFinder output from all 47 species
Solyc11g072840.1.1 Solyc11g072840 histone (H4) 0.01 OrthoFinder output from all 47 species
Zm00001e009859_P001 Zm00001e009859 histone (H4) 0.01 OrthoFinder output from all 47 species
Zm00001e019368_P001 Zm00001e019368 histone (H4) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 34 96
No external refs found!