Cre16.g649900


Description : Chromatin organisation.histones.H3-type histone


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g649900
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00168040 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
AMTR_s00030p00044250 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
AT1G09200 No alias Histone superfamily protein 0.01 OrthoFinder output from all 47 species
AT3G27360 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G10390 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G10400 No alias Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G65360 No alias Histone superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g014652 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g025095 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g43453 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g37515 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g07784 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01982.t1 Aspi01Gene01982 histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02052.t1 Aspi01Gene02052 histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene58554.t1 Aspi01Gene58554 histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G075200.1 Ceric.06G075200 histone *(H3) & original description: pacid=50619967... 0.02 OrthoFinder output from all 47 species
Ceric.10G013500.1 Ceric.10G013500 histone *(H3) & original description: pacid=50612923... 0.02 OrthoFinder output from all 47 species
Ceric.10G015500.1 Ceric.10G015500 histone *(H3) & original description: pacid=50612308... 0.02 OrthoFinder output from all 47 species
Ceric.12G022300.1 Ceric.12G022300 histone *(H3) & original description: pacid=50601599... 0.02 OrthoFinder output from all 47 species
Ceric.14G025000.1 Ceric.14G025000 histone *(H3) & original description: pacid=50634383... 0.02 OrthoFinder output from all 47 species
Ceric.14G051600.1 Ceric.14G051600 histone *(H3) & original description: pacid=50634175... 0.01 OrthoFinder output from all 47 species
Ceric.19G072200.1 Ceric.19G072200 histone *(H3) & original description: pacid=50576221... 0.02 OrthoFinder output from all 47 species
Ceric.19G072300.1 Ceric.19G072300 histone *(H3) & original description: pacid=50576158... 0.02 OrthoFinder output from all 47 species
Ceric.1Z177000.1 Ceric.1Z177000 histone *(H3) & original description: pacid=50628432... 0.02 OrthoFinder output from all 47 species
Ceric.27G025100.1 Ceric.27G025100 histone *(H3) & original description: pacid=50605832... 0.02 OrthoFinder output from all 47 species
Ceric.27G025200.1 Ceric.27G025200 histone *(H3) & original description: pacid=50606238... 0.02 OrthoFinder output from all 47 species
Ceric.27G026100.1 Ceric.27G026100 histone *(H3) & original description: pacid=50605944... 0.02 OrthoFinder output from all 47 species
Ceric.27G029000.1 Ceric.27G029000 histone *(H3) & original description: pacid=50605580... 0.02 OrthoFinder output from all 47 species
Ceric.27G029300.1 Ceric.27G029300 histone *(H3) & original description: pacid=50605405... 0.02 OrthoFinder output from all 47 species
Ceric.27G029400.1 Ceric.27G029400 histone *(H3) & original description: pacid=50605419... 0.02 OrthoFinder output from all 47 species
Ceric.30G057000.1 Ceric.30G057000 histone *(H3) & original description: pacid=50609365... 0.02 OrthoFinder output from all 47 species
Ceric.37G016300.1 Ceric.37G016300 histone *(H3) & original description: pacid=50616425... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000970.26 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g264650 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g265250 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g266650 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g267950 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274000 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274101 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274350 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274850 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g275750 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g276600 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g276850 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g504650 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g504800 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g505500 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g506300 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g506500 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre13.g569950 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g708150 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g708700 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g709050 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Dde_g01832 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g47570 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01026582001 No alias Histone H3.2 OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
GSVIVT01027073001 HTR12, CENH3 Cell cycle.mitosis and meiosis.chromosome... 0.01 OrthoFinder output from all 47 species
GSVIVT01034510001 No alias Histone H3.2 OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
Gb_08475 No alias histone (H3) 0.01 OrthoFinder output from all 47 species
Gb_15586 No alias histone (H3) 0.01 OrthoFinder output from all 47 species
Gb_23769 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Gb_27618 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Gb_29026 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Gb_29027 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Gb_30564 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Gb_36661 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Gb_40804 No alias histone (H3) 0.01 OrthoFinder output from all 47 species
LOC_Os01g64640.1 LOC_Os01g64640 histone (H3) 0.02 OrthoFinder output from all 47 species
LOC_Os03g27310.2 LOC_Os03g27310 histone (H3) 0.02 OrthoFinder output from all 47 species
LOC_Os04g34240.1 LOC_Os04g34240 histone (H3) 0.02 OrthoFinder output from all 47 species
LOC_Os05g36280.1 LOC_Os05g36280 histone (H3) 0.02 OrthoFinder output from all 47 species
LOC_Os05g41080.1 LOC_Os05g41080 histone H3 variant (CENH3) 0.02 OrthoFinder output from all 47 species
LOC_Os06g04030.1 LOC_Os06g04030 histone (H3) 0.02 OrthoFinder output from all 47 species
LOC_Os06g06460.1 LOC_Os06g06460 histone (H3) 0.01 OrthoFinder output from all 47 species
LOC_Os06g06510.1 LOC_Os06g06510 histone (H3) 0.02 OrthoFinder output from all 47 species
LOC_Os11g05730.1 LOC_Os11g05730 histone (H3) 0.02 OrthoFinder output from all 47 species
Len_g04468 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Len_g16288 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g23375 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10432805g0020 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
MA_113838g0010 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
MA_197719g0010 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
MA_210354g0010 No alias histone (H3) 0.01 OrthoFinder output from all 47 species
MA_222556g0010 No alias Histone H3.2 OS=Lilium longiflorum (sp|q402e1|h32_lillo : 116.0) 0.01 OrthoFinder output from all 47 species
MA_24261g0010 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
MA_356208g0010 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
MA_475294g0010 No alias histone (H3) 0.01 OrthoFinder output from all 47 species
MA_561217g0010 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
MA_74555g0010 No alias Histone H3.2 OS=Pisum sativum (sp|p68427|h32_pea : 98.2) 0.02 OrthoFinder output from all 47 species
Mp3g09090.1 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Mp3g11410.1 No alias histone (H3) 0.01 OrthoFinder output from all 47 species
Mp7g10730.1 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Mp7g18030.1 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Ore_g10766 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g19108 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c22_4790V3.1 Pp3c22_4790 Histone superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c24_13230V3.1 Pp3c24_13230 Histone superfamily protein 0.01 OrthoFinder output from all 47 species
Sam_g15174 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo103546 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Smo438193 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Smo78992 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Solyc01g074000.3.1 Solyc01g074000 histone (H3) 0.03 OrthoFinder output from all 47 species
Solyc01g079110.4.1 Solyc01g079110 histone (H3) 0.03 OrthoFinder output from all 47 species
Solyc01g080600.4.1 Solyc01g080600 histone (H3) 0.03 OrthoFinder output from all 47 species
Solyc01g086820.4.1 Solyc01g086820 histone (H3) 0.03 OrthoFinder output from all 47 species
Solyc02g077480.1.1 Solyc02g077480 histone (H3) 0.03 OrthoFinder output from all 47 species
Solyc10g008910.1.1 Solyc10g008910 histone (H3) 0.03 OrthoFinder output from all 47 species
Solyc12g056540.1.1 Solyc12g056540 histone (H3) 0.03 OrthoFinder output from all 47 species
Spa_g33395 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g33705 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52464 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03087 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04797 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g05786 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e008155_P001 Zm00001e008155 histone (H3) 0.02 OrthoFinder output from all 47 species
Zm00001e008160_P001 Zm00001e008160 histone (H3) 0.01 OrthoFinder output from all 47 species
Zm00001e016861_P001 Zm00001e016861 histone (H3) 0.02 OrthoFinder output from all 47 species
Zm00001e019170_P001 Zm00001e019170 histone (H3) 0.02 OrthoFinder output from all 47 species
Zm00001e040856_P001 Zm00001e040856 histone (H3) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 131
No external refs found!