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Aliases : CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1, DDM1
Description : ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana
Gene families : OG0000102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000102_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00086p00165640 | PKL, GYM, CHR6,... | Chromatin organisation.chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G44980 | No alias | SNF2 domain-containing protein / helicase... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G06010 | ATCHR12 | Homeotic gene regulator | 0.02 | OrthoFinder output from all 47 species | |
| AT5G66750 | CHR01, CHR1,... | chromatin remodeling 1 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g012014 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g02726 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g11306 | ATCHR12 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g17670 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g05226 | CHR5 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g25745 | CHR17 | ATPase component *(CHR11/CHR17) of ISWI chromatin... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene52534.t1 | PKL, GYM, CHR6,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g007848 | CHR01, CHR1,... | not classified & original description: CDS=1-2349 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0354.g066689 | CHR11 | ATPase component *(CHR11/CHR17) of ISWI chromatin... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0754.g085337 | No alias | not classified & original description: CDS=1-1965 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g23143 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.02G040400.1 | CHR5, Ceric.02G040400 | not classified & original description: pacid=50584074... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.03G025400.1 | PKL, GYM, CHR6,... | not classified & original description: pacid=50572032... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.10G020300.1 | CHR5, Ceric.10G020300 | component *(CHR5) of SAGA transcription co-activator... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.21G025000.1 | CHR11, Ceric.21G025000 | ATPase component *(CHR11/CHR17) of ISWI chromatin... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.36G015700.1 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.02 | OrthoFinder output from all 47 species | |
| ChrUn.fgenesh.mRNA.85 | CHR17 | chromatin remodeling factor (Iswi) | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000128.11 | CHR17 | ISWI chromatin-remodeling complex ATPase CHR17... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000217.25 | SYD, CHR3 | Chromatin structure-remodeling complex protein SYD... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g15532 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g02069 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g19159 | CHR11 | ATPase component *(CHR11/CHR17) of ISWI chromatin... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g15247 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g18387 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01012117001 | PKR1, CHR4 | RNA biosynthesis.transcriptional activation.PHD finger... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01017791001 | CHR17 | Chromatin organisation.chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01018979001 | CHR01, CHR1,... | ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Gb_05671 | PKL, GYM, CHR6,... | CHD3-type chromatin-remodeling factor PICKLE... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g05230.1 | ATCHR12, LOC_Os05g05230 | chromatin remodeling factor (Snf2) | 0.01 | OrthoFinder output from all 47 species | |
| Len_g01407 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g27757 | CHR01, CHR1,... | chromatin remodeling factor *(DDM1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g57697 | PKL, GYM, CHR6,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g16058 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g28014 | PKL, GYM, CHR6,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g30624 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.02 | OrthoFinder output from all 47 species | |
| Mp2g26680.1 | PKL, GYM, CHR6,... | CHD3-type chromatin-remodeling factor PICKLE... | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g15030.1 | CHR17 | chromatin remodeling factor (Iswi) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g15707 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g16227 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g03161 | CHR17 | ATPase component *(CHR11/CHR17) of ISWI chromatin... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g16130 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g26259 | SYD, CHR3 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g13843 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g32094 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g29220 | No alias | component *(CHR5) of SAGA transcription co-activator... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g36819 | No alias | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g50499 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo102612 | CHR5 | Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g067390.4.1 | CHR11, Solyc01g067390 | chromatin remodeling factor (Iswi) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g062780.4.1 | CHR01, CHR1,... | chromatin remodeling factor (DDM1) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g054560.3.1 | CHR11, Solyc06g054560 | chromatin remodeling factor (Iswi) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g065730.3.1 | PKL, GYM, CHR6,... | chromatin remodeling factor (Chd3/Mi-2) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g062010.3.1 | SYD, CHR3, Solyc11g062010 | chromatin remodeling factor (Snf2) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g17788 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g21765 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g02199 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011541_P001 | CHR01, CHR1,... | chromatin remodeling factor (DDM1) | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e017643_P001 | CHR17, Zm00001e017643 | chromatin remodeling factor (Iswi) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008168 | methyltransferase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004527 | exonuclease activity | IEP | HCCA |
| No external refs found! |