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Description : RNA processing.RNA modification.rRNA/tRNA methylation.TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex.TRM732 component
Gene families : OG0006426 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006426_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre15.g642050 | |
| Cluster | HCCA: Cluster_78 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00258470 | evm_27.TU.AmTr_v1... | RNA processing.RNA modification.rRNA/tRNA... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G55160 | No alias | unknown protein; EXPRESSED IN: 11 plant structures;... | 0.07 | OrthoFinder output from all 47 species | |
| Aob_g33335 | No alias | component *(TRM732) of TRM7-TRM732/TRM734 tRNA... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.12G034300.1 | Ceric.12G034300 | component *(TRM732) of TRM7-TRM732/TRM734 tRNA... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01011388001 | No alias | RNA processing.RNA modification.rRNA/tRNA... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g07290.1 | LOC_Os08g07290 | component TRM732 of TRM7-TRM732/TRM734 tRNA... | 0.09 | OrthoFinder output from all 47 species | |
| Ore_g33228 | No alias | component *(TRM732) of TRM7-TRM732/TRM734 tRNA... | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g62901 | No alias | component *(TRM732) of TRM7-TRM732/TRM734 tRNA... | 0.01 | OrthoFinder output from all 47 species | |
| Smo74297 | No alias | RNA processing.RNA modification.rRNA/tRNA... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g062650.3.1 | Solyc03g062650 | component TRM732 of TRM7-TRM732/TRM734 tRNA... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g15714 | No alias | component *(TRM732) of TRM7-TRM732/TRM734 tRNA... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e040139_P001 | Zm00001e040139 | component TRM732 of TRM7-TRM732/TRM734 tRNA... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR019442 | THADA/TRM732_DUF2428 | 80 | 125 |
| No external refs found! |