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  5. Cre14.g625802

Cre14.g625802


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase


Gene families : OG0001584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre14.g625802

Target Alias Description ECC score Gene Family Method Actions
Adi_g059356 RDO4, HUB1 E3 ubiquitin ligase *(HUB) & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g104160 RDO4, HUB1 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g116660 HUB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02632 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13983 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g01150 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16567 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09718 RDO4, HUB1 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28102.t1 HUB2, Aspi01Gene28102 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55696.t1 HUB2, Aspi01Gene55696 E3 ubiquitin ligase *(HUB) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.14G031800.1 RDO4, HUB1,... E3 ubiquitin ligase *(HUB) & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g04023 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g04109 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01018223001 RDO4, HUB1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01025404001 HUB2 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Lfl_g11288 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430809g0020 HUB2 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_10433679g0010 RDO4, HUB1 RING-HC-class E3 ligase 0.01 OrthoFinder output from all 47 species
Mp6g03540.1 RDO4, HUB1 RING-HC-class E3 ligase 0.02 OrthoFinder output from all 47 species
Msp_g06195 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08622 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35898 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01320 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g07599 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12359 No alias E3 ubiquitin ligase *(HUB) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g35279 No alias E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Smo175555 HUB2 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Solyc01g006040.3.1 HUB2, Solyc01g006040 RING-HC-class E3 ligase 0.01 OrthoFinder output from all 47 species
Spa_g08099 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g28928 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g55706 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06090 HUB2 E3 ubiquiTin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g15227 RDO4, HUB1 E3 ubiquiTin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013143_P005 RDO4, HUB1,... RING-HC-class E3 ligase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:2001070 starch binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!