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  5. Cre14.g619133

Cre14.g619133 (SDH1-1)


Aliases : SDH1-1

Description : Cellular respiration.tricarboxylic acid cycle.succinate dehydrogenase complex.SDH1-type flavoprotein component


Gene families : OG0003596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003596_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre14.g619133
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Adi_g079525 SDH1-2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g06281 SDH1-1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.01 OrthoFinder output from all 47 species
Ehy_g15779 SDH1-1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 OrthoFinder output from all 47 species
GSVIVT01018976001 SDH1-1 Cellular respiration.tricarboxylic acid cycle.succinate... 0.04 OrthoFinder output from all 47 species
MA_10427069g0010 SDH1-1 flavoprotein component SDH1 of succinate dehydrogenase complex 0.03 OrthoFinder output from all 47 species
MA_119336g0010 SDH1-1 flavoprotein component SDH1 of succinate dehydrogenase complex 0.02 OrthoFinder output from all 47 species
MA_20247g0020 SDH1-2 Succinate dehydrogenase [ubiquinone] flavoprotein... 0.05 OrthoFinder output from all 47 species
Nbi_g14078 SDH1-1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.05 OrthoFinder output from all 47 species
Solyc02g085350.4.1 SDH1-1, Solyc02g085350 flavoprotein component SDH1 of succinate dehydrogenase complex 0.04 OrthoFinder output from all 47 species
Tin_g16793 SDH1-1 EC_1.3 oxidoreductase acTing on CH-CH group of donor &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004474 malate synthase activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
CC GO:0005779 obsolete integral component of peroxisomal membrane IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006097 glyoxylate cycle IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0046487 glyoxylate metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR015939 Fum_Rdtase/Succ_DH_flav-like_C 501 635
IPR003953 FAD-binding_2 50 446
No external refs found!