Cre13.g590900

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase

Gene families : OG0002121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002121_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre13.g590900
Cluster	HCCA: Cluster_80

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000792.7	No alias	Protein degradation.peptide tagging.Related-to-Ubiquitin...	0.01	OrthoFinder output from all 47 species
LOC_Os01g01700.1	LOC_Os01g01700	RUB ligase E3 protein (RBX1). UBQ-E2-recruiting...	0.02	OrthoFinder output from all 47 species
LOC_Os02g47870.1	LOC_Os02g47870	RUB ligase E3 protein (RBX1). UBQ-E2-recruiting...	0.01	OrthoFinder output from all 47 species
MA_45099g0010	No alias	RUB ligase E3 protein (RBX1). UBQ-E2-recruiting...	0.01	OrthoFinder output from all 47 species
Ppi_g25426	No alias	core component *(RBX1) of CULLIN-based E3 ubiquitin...	0.02	OrthoFinder output from all 47 species
Sam_g19669	No alias	core component *(RBX1) of CULLIN-based E3 ubiquitin...	0.01	OrthoFinder output from all 47 species
Zm00001e017143_P001	Zm00001e017143	RUB ligase E3 protein (RBX1). UBQ-E2-recruiting...	0.03	OrthoFinder output from all 47 species
Zm00001e025643_P003	Zm00001e025643	RUB ligase E3 protein (RBX1). UBQ-E2-recruiting...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	None	Extended
CC	GO:0000152	nuclear ubiquitin ligase complex	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005680	anaphase-promoting complex	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
CC	GO:0031461	cullin-RING ubiquitin ligase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005509	calcium ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR024991	RING-H2_APC11	4	83

External Links

No external refs found!

Cre13.g590900

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation