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  5. Cre13.g575900

Cre13.g575900


Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0003096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003096_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g575900

Target Alias Description ECC score Gene Family Method Actions
Adi_g061118 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.02 OrthoFinder output from all 47 species
Adi_g087436 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.02 OrthoFinder output from all 47 species
Aev_g09208 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.02 OrthoFinder output from all 47 species
Als_g26903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02258 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.02 OrthoFinder output from all 47 species
Ceric.03G039000.1 SE, Ceric.03G039000 component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.02 OrthoFinder output from all 47 species
Dcu_g14201 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.04 OrthoFinder output from all 47 species
GSVIVT01027348001 SE RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
GSVIVT01037454001 SE RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
LOC_Os06g48530.1 SE, LOC_Os06g48530 C2H2 zinc finger transcription factor. component SERRATE... 0.03 OrthoFinder output from all 47 species
LOC_Os08g40560.1 SE, LOC_Os08g40560 C2H2 zinc finger transcription factor. component SERRATE... 0.02 OrthoFinder output from all 47 species
Msp_g00688 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.01 OrthoFinder output from all 47 species
Nbi_g10038 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.02 OrthoFinder output from all 47 species
Pir_g04707 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.03 OrthoFinder output from all 47 species
Pnu_g00841 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.02 OrthoFinder output from all 47 species
Sam_g19467 No alias component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.05 OrthoFinder output from all 47 species
Solyc01g009090.3.1 SE, Solyc01g009090 C2H2 zinc finger transcription factor. component SERRATE... 0.03 OrthoFinder output from all 47 species
Spa_g54768 SE component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... 0.03 OrthoFinder output from all 47 species
Zm00001e003610_P002 SE, Zm00001e003610 C2H2 zinc finger transcription factor. component SERRATE... 0.02 OrthoFinder output from all 47 species
Zm00001e013155_P002 SE, Zm00001e013155 C2H2 zinc finger transcription factor. component SERRATE... 0.02 OrthoFinder output from all 47 species
Zm00001e021924_P001 SE, Zm00001e021924 C2H2 zinc finger transcription factor. component SERRATE... 0.02 OrthoFinder output from all 47 species
Zm00001e030244_P001 SE, Zm00001e030244 C2H2 zinc finger transcription factor. component SERRATE... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007042 SERRATE/Ars2_C 420 532
No external refs found!